| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_2857 |
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| Symbol | |
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| ID | 6088587 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | + |
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| Start bp | 3151350 |
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| End bp | 3152465 |
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| Gene Length | 1116 bp |
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| Protein Length | 371 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 641597928 |
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| Product | porin |
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| Protein accession | YP_001721586 |
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| Protein GI | 170025081 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.454817 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACGTA ATATTCTGGC AATCCTTATA CCGACATTAT TAGTTGCAAC CACTTCACAT
GCGGCAGAAA TTTACAACAA AGACGGTAAT AAGCTGGATT TATATGGAAA AGTAAAAGCG
TTACATTACT TTTCTGATAA TACAAAAAGT GATGGTGATA AATCGTATGT TCGCCTTGGT
TTCAAAGGTG TCACTCAAAT AACGGATGAA CTGAGCGGTT ACGGCCAGTG GGAATATAAC
TTCGCGGCTA ACTATGCCGA GAGCCAAGAA GCAAAAGACA ATAAAACACG CTTAGCCTTT
GCCGGTTTAC GTTACGGTAA TTTAGGTTCA ATCGACTATG GCCGTAACTA CGGCGTGTTA
TATGATATTG CAGCCTGGAC CGATATGCTG CCTGAGTTCG GGAATGACAG CTACACCAGA
ACCGATAATT TTATGACTGG CCGTACCACG GGCGTTGCTA CCTACCGCAA CACAGATTTC
TTTGGTTTGG TTGATGGTCT GAAATTCTCT CTGCAATATC AAGGCAAGAA CGGTGCCGAA
GGCGAGACGA ATAACGGGCG TGCTGATACA TCCAAGCAGA ATGGCGACGG TTTCGGTTTA
TCTTCCAGCT ATGAGATTGG CGCAGGTGTC AGCGTAGGTG CAGCCTATGC TTCATCTAAC
CGCACCCTAG CCCAGAAGAA CAGTACCTTT GGTAAAGGCG ATAAAGCCGA TGCCTGGACT
ACCGGCCTGA AATATAGCGA TAACGGTGTT TATTTAGCGG CCAATTATGC AGAAACGCGC
AATATGACAC CAATCTCTGG TAATGCGGTA ATTAATAACG TGTCAACCAG CGTAAGTGGT
TTTGCTAATA AAACTCAAAA CATTGAGTTA GTGGCTCAAT ATTTATTTGA CTTTGGTTTA
AAACCTTCCA TTGCCTATAT TCAATCTAAA GGAAAAGATA TCGAAGGCAT TGGTGACACC
GACCTGGTTA AATATGTCGA TATTGGTGCA ACATATTACT TCAACAAAAA CATGTCCACG
TATGTTGATT ATAAAATAAA CCAACTCAAT GATGATAATA AACTAAAATT GAATACTGAT
AACGTTGTAG CACTTGGTCT GGTGTATCAG TTCTAA
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| Protein sequence | MKRNILAILI PTLLVATTSH AAEIYNKDGN KLDLYGKVKA LHYFSDNTKS DGDKSYVRLG
FKGVTQITDE LSGYGQWEYN FAANYAESQE AKDNKTRLAF AGLRYGNLGS IDYGRNYGVL
YDIAAWTDML PEFGNDSYTR TDNFMTGRTT GVATYRNTDF FGLVDGLKFS LQYQGKNGAE
GETNNGRADT SKQNGDGFGL SSSYEIGAGV SVGAAYASSN RTLAQKNSTF GKGDKADAWT
TGLKYSDNGV YLAANYAETR NMTPISGNAV INNVSTSVSG FANKTQNIEL VAQYLFDFGL
KPSIAYIQSK GKDIEGIGDT DLVKYVDIGA TYYFNKNMST YVDYKINQLN DDNKLKLNTD
NVVALGLVYQ F
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