| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_2855 |
|---|
| Symbol | |
|---|
| ID | 6089369 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis YPIII |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010465 |
|---|
| Strand | + |
|---|
| Start bp | 3147393 |
|---|
| End bp | 3148832 |
|---|
| Gene Length | 1440 bp |
|---|
| Protein Length | 479 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 641597926 |
|---|
| Product | catalase |
|---|
| Protein accession | YP_001721584 |
|---|
| Protein GI | 170025079 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0753] Catalase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAAGA AGAAAGGATT AACCACCGCG GCAGGCGCTC CCGTTGTCGA TAATAATAAT
GTTATTACGG CTGGCCGCCG TGGCCCGATG CTACTGCAAG ATGTTTGGTT CCTGGAAAAA
TTAGCCCATT TTGACCGTGA AGTGATCCCT GAGCGCCGCA TGCATGCTAA AGGCTCCGGT
GCATACGGTA CGTTCACCGT GACTCATGAT ATTACCCAAT ATACTCGCGC AAAAATTTTC
TCAGAGATCG GTAAAAAAAC AGACATGTTT GTCCGCTTCT CCACTGTGGC CGGTGAACGC
GGTGCTGCAG ATGCTGAACG TGATATCCGT GGTTTTGCCA TGAAGTTTTA TACCGAGGAA
GGCAACTGGG ATTTGGTTGG TAACGATACA CCGGTCTTCT ATTTACGTGA TCCACTGAAG
TTCCCGGACC TGAACCACGT GGTCAAACGC GACCCTCGTA CCAACCTGCG TAACCCGGTT
TATAAATGGG ATTTCTTCTC TCAACTGCCA GAGGCGCTGC ATCAGTTAAC CATCGATTTC
AGTGACCGTG GCTTGCCAAA ATCTTACCGT CATATGCACG GTTTCGGTAG CCATACCTTT
AGCCTAATCA ATGCCAATAA TGAACGTTTT TGGGTTAAAT TCCATTTCCG TTGCCAGCAA
GGCATTGAAA ACCTGATGGA CGATGAAGCC GAAAAACTGA TTGGTTCTGA TAGAGAAAGC
TCGCAGCGTG ATCTGTATGA AGCGATTGAG CGCGGTGACT TCCCGCGTTG GAAACTACAG
ATTCAGGTAA TGCCGGAGCA CAAAGCATCA CAAACACCTT ATAACCCATT TGATCTGACT
AAAGTCTGGC CGCACGGTGA TTACCCGCTG ATCGATGTCG GCTACTTCGA ATTGAATCGC
AACCCGGAAA ACTACTTCGC TGAAGTGGAA CAATCCTCAT TCAATCCAGC TAACGTTGTC
CCTGGGATCA GTTTCTCCCC AGACCGCATG TTACAAGGCC GCCTGTTCTC ATACGGTGAT
GCCGCCCGCT ATCGTTTAGG GGTTAACCAT CATCAGATCC CGGTGAACAG TGCTAAATGT
CCGTTCCATA ATTATCATCG TGACGGCGCA ATGCGCGTTG ATGGTAACAG TGGTAATGGC
GCAACCTATG AGCCAAACAG CTTTGGCCTG TTCCAAGAAC AGCCTGATTT CAGCGAACCG
CCACTGACAT TGGAAGGGGC GGCAGATCAT TGGAATCACC GCGAAGACAC CGACTATTTC
TCTCAACCAC GGGCGCTGTT TAACCTGCTC AGTGAAGAAG AGCATCAACG CATGTTCACC
CGTATTGCGG GTGAGTTATC GCAAGTTCCT GAAGCTATCC AACGCCGCCA GATAGCGTTG
TTTACGCAGG TTGACCCGGC TTATGGCGCC GGTGTGAAAA AAGCACTTGG CCTGAATTAA
|
|---|
| Protein sequence | MSKKKGLTTA AGAPVVDNNN VITAGRRGPM LLQDVWFLEK LAHFDREVIP ERRMHAKGSG
AYGTFTVTHD ITQYTRAKIF SEIGKKTDMF VRFSTVAGER GAADAERDIR GFAMKFYTEE
GNWDLVGNDT PVFYLRDPLK FPDLNHVVKR DPRTNLRNPV YKWDFFSQLP EALHQLTIDF
SDRGLPKSYR HMHGFGSHTF SLINANNERF WVKFHFRCQQ GIENLMDDEA EKLIGSDRES
SQRDLYEAIE RGDFPRWKLQ IQVMPEHKAS QTPYNPFDLT KVWPHGDYPL IDVGYFELNR
NPENYFAEVE QSSFNPANVV PGISFSPDRM LQGRLFSYGD AARYRLGVNH HQIPVNSAKC
PFHNYHRDGA MRVDGNSGNG ATYEPNSFGL FQEQPDFSEP PLTLEGAADH WNHREDTDYF
SQPRALFNLL SEEEHQRMFT RIAGELSQVP EAIQRRQIAL FTQVDPAYGA GVKKALGLN
|
|---|
| |