| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_2852 |
|---|
| Symbol | |
|---|
| ID | 6089617 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis YPIII |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010465 |
|---|
| Strand | - |
|---|
| Start bp | 3143213 |
|---|
| End bp | 3144406 |
|---|
| Gene Length | 1194 bp |
|---|
| Protein Length | 397 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 641597923 |
|---|
| Product | competence damage-inducible protein A |
|---|
| Protein accession | YP_001721581 |
|---|
| Protein GI | 170025076 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1058] Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA |
|---|
| TIGRFAM ID | [TIGR00177] molybdenum cofactor synthesis domain
[TIGR00200] competence/damage-inducible protein CinA N-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.309033 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCAGAG TCGAGATGTT GAGTACCGGA GATGAAGTGC TGCATGGGCA GATTATTGAT
ACCAATGCTG CCTGGCTGGC TGATTATTTC TTTAATCAGG GTTTGCCAAT CAGCAGCCGG
GAAACCGTCG GCGATGATAT TTCGGCCCTT ATTGAGGTGT TGACTGAGCG CAGTCAAGTT
GCTGATGTGT TGATTGTCAA TGGTGGCCTG GGGCCGACCA GTGATGATTT GAGCGCCTTG
GCTGCCGCAC GAGCTGCGGG TGTGGAACTG ATTGAGCACC TGGAATGGAT TGCTCGCATG
GAAGCGTTCT TTATAGCGCG TGGCCGCGTG ATGTCGGCAA CTAATCGTAA GCAGGCCCAT
ATTCCGGCCA ATGCTGAAAT GCTGGACAAC CCCGTGGGCA CGGCATGTGG CTTTGTTCTG
CGGCTAAATA AGTGCCTGAT GTTTTTCACA CCGGGGGTGC CATCTGAATT TAAAGTGATG
GTTGAACAGC AGATTATGCC GCGTCTACGG CAGCATTTTG AGGTGGCTGA ACCGCCATTA
TGTTTACGGA TGACCACTTT TGGTCGTTCA GAGAGTGATC TGGCGCTGGA GCTGGATCCG
TTACCACTAC CTGAAGGCGT GGTGCTGGGT TACCGTTCAT CGGCCCCAAT CATTGAGTTG
AAACTCACCG GCCCAGCGTC ACAACGCTCG GCAATGGAGC AAGTCTGGCA GCAGGTGAGG
GCGGTGGCAG GCGAAAGCAC GCTTTTCGAA GGTACTCAGG GCTTGCCAGC ACTCTTAACC
GAACAATTGA CACAGCGTGG CTTATTGCTG GCGGTGAGTG AGCAATTTAC CGCTGGGCTG
ATGAACTGGC AGTTACAGAG TGCGGGAGCA CCACTGGTCG GCGGTGAGTT GTTACCCGCG
CATTGCCAGG AGTCGCTGAG TGAGGTGGCT AGCCGCGCAC AGTCATTGTC TACGCTGTGT
GGTGCACAGG TCGTGTTGGC TATCAGTGCG ATGCAACATG ATTGTCTGAG TGTGGCATTA
CATACCCCAG AAAGGACTTT TGCTCAGACA GTGCGCTATC AGGCGAGTCG CCATGGTTTG
CGTATCCGTC AGGAAAGCAG CGCGATGTTG GCACAGGATA TGTTACGCCG CTGGCTAAAG
GGCGGCTCAG TGTGCGGGCA GCATGGTTGG TTGGATATTA TTGAGATTTT GTAA
|
|---|
| Protein sequence | MIRVEMLSTG DEVLHGQIID TNAAWLADYF FNQGLPISSR ETVGDDISAL IEVLTERSQV
ADVLIVNGGL GPTSDDLSAL AAARAAGVEL IEHLEWIARM EAFFIARGRV MSATNRKQAH
IPANAEMLDN PVGTACGFVL RLNKCLMFFT PGVPSEFKVM VEQQIMPRLR QHFEVAEPPL
CLRMTTFGRS ESDLALELDP LPLPEGVVLG YRSSAPIIEL KLTGPASQRS AMEQVWQQVR
AVAGESTLFE GTQGLPALLT EQLTQRGLLL AVSEQFTAGL MNWQLQSAGA PLVGGELLPA
HCQESLSEVA SRAQSLSTLC GAQVVLAISA MQHDCLSVAL HTPERTFAQT VRYQASRHGL
RIRQESSAML AQDMLRRWLK GGSVCGQHGW LDIIEIL
|
|---|
| |