Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_2829 |
Symbol | |
ID | 6087290 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 3113852 |
End bp | 3114574 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641597898 |
Product | XRE family transcriptional regulator |
Protein accession | YP_001721558 |
Protein GI | 170025053 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAGA AGCCATTAAC GCCCGAACAG TTAGATGACG CTAAGCGGCT GAAAGAGCTG TTTAATGCGA AGAAAAAAGC ACTGGGTATA TCCCAGGAAT CTGTTGCACA TGAATTGGGC GTCGGCCAAA GTGCCGTCAA CCAGTTCCTC AACGGCGTAA ACCCGCTCAA TATCACCAAC GCGGCTGCTT TTGCAAAAGT ACTGAATGAA CCCATCAGTA GCTTTAGCCC TTCTCTGGCC AAAGAGTTGG CAAAAATGGC GGAGAGCCTG TCCATCACTA CCCGCTCAGG TGCAAAGGAT AAACCCGCGG TTTCCGTCGC TAATAGCTAT CCGTTAATCA GTTGGATAAG CGCGGGTAAC TGGTATGAAG CGATAGAGCC GTATACGCTG CGTGACATTG AGATCTGGCC TGAATCGACC AAGCATGCCC ATGAGAGTGC ATTTTGGTTG AGTGTAAAAG GCGATTCCAT GACCTCGCCA TCAGGTATCA GCTTCCCAGA AGGGATGATT ATTCTGGTTG ACCCAGAAAA AGAGCCCATG CCGGGTAATT TTGTGATCGC CAAACTGACG GATGATAACG AAGCAACATT TAAGAAGTTA GTGGTTGATG CGGGCATTAA GTACTTGAAA CCCTTGAATC CCGCGTATCG GTTAATTGAA CTGAACGGTA ACTGTAAGAT ACTCGGTGTG GTTGTTGATG CCCGTTGGTT GCAAATAGAT TAG
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Protein sequence | MKKKPLTPEQ LDDAKRLKEL FNAKKKALGI SQESVAHELG VGQSAVNQFL NGVNPLNITN AAAFAKVLNE PISSFSPSLA KELAKMAESL SITTRSGAKD KPAVSVANSY PLISWISAGN WYEAIEPYTL RDIEIWPEST KHAHESAFWL SVKGDSMTSP SGISFPEGMI ILVDPEKEPM PGNFVIAKLT DDNEATFKKL VVDAGIKYLK PLNPAYRLIE LNGNCKILGV VVDARWLQID
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