Gene YPK_2829 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_2829 
Symbol 
ID6087290 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp3113852 
End bp3114574 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content48% 
IMG OID641597898 
ProductXRE family transcriptional regulator 
Protein accessionYP_001721558 
Protein GI170025053 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAGA AGCCATTAAC GCCCGAACAG TTAGATGACG CTAAGCGGCT GAAAGAGCTG 
TTTAATGCGA AGAAAAAAGC ACTGGGTATA TCCCAGGAAT CTGTTGCACA TGAATTGGGC
GTCGGCCAAA GTGCCGTCAA CCAGTTCCTC AACGGCGTAA ACCCGCTCAA TATCACCAAC
GCGGCTGCTT TTGCAAAAGT ACTGAATGAA CCCATCAGTA GCTTTAGCCC TTCTCTGGCC
AAAGAGTTGG CAAAAATGGC GGAGAGCCTG TCCATCACTA CCCGCTCAGG TGCAAAGGAT
AAACCCGCGG TTTCCGTCGC TAATAGCTAT CCGTTAATCA GTTGGATAAG CGCGGGTAAC
TGGTATGAAG CGATAGAGCC GTATACGCTG CGTGACATTG AGATCTGGCC TGAATCGACC
AAGCATGCCC ATGAGAGTGC ATTTTGGTTG AGTGTAAAAG GCGATTCCAT GACCTCGCCA
TCAGGTATCA GCTTCCCAGA AGGGATGATT ATTCTGGTTG ACCCAGAAAA AGAGCCCATG
CCGGGTAATT TTGTGATCGC CAAACTGACG GATGATAACG AAGCAACATT TAAGAAGTTA
GTGGTTGATG CGGGCATTAA GTACTTGAAA CCCTTGAATC CCGCGTATCG GTTAATTGAA
CTGAACGGTA ACTGTAAGAT ACTCGGTGTG GTTGTTGATG CCCGTTGGTT GCAAATAGAT
TAG
 
Protein sequence
MKKKPLTPEQ LDDAKRLKEL FNAKKKALGI SQESVAHELG VGQSAVNQFL NGVNPLNITN 
AAAFAKVLNE PISSFSPSLA KELAKMAESL SITTRSGAKD KPAVSVANSY PLISWISAGN
WYEAIEPYTL RDIEIWPEST KHAHESAFWL SVKGDSMTSP SGISFPEGMI ILVDPEKEPM
PGNFVIAKLT DDNEATFKKL VVDAGIKYLK PLNPAYRLIE LNGNCKILGV VVDARWLQID