Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_2825 |
Symbol | |
ID | 6088144 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 3110856 |
End bp | 3111587 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641597894 |
Product | putative aldolase |
Protein accession | YP_001721554 |
Protein GI | 170025049 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGAACAGCC CCCCGTTTTC AGAGCCGCCA CCATCTTCGG AGCCGCCACC AGCTTCAAAA CTGTCACCAC CTGCCAAACA AGTACCCTTT TCGGAGCAAC AAGTGCGTGA TGATTTGGTG AACTACGCCC GCTCATTATT CCAACGGGGG TTGAGCAGTG GGGGTTCCGG CAATATTAGC GTCAAGCTGC CTGACGGTAG CTTTCTGGTC ACTCCGACCA ATTCCTGCCT GGGTGAATTG GATAGCCAAA CACTGAGTAA ACTCGATGCC GAGGGGAACC ACATCAGCGG TGACAAACCG TCGAAAGAGG TGCCGATGCA TTTGGCAATG TACCGTGCCA GATCCACGTG CGGGGCGGTG GTTCATTTGC ACTCACCGTA TCTGACCGCC TTGTCATGTC TCACAAATAT TGATCATACG AATTGTTTGC CCCCCATTAC ACCTTACTAT GTGATGCGCA TCGGGCGTCT TCCTTTGTTG TCTTATATGA AACCCGGCGA TCCGGCCATT GCCACCGCCC TTGCCGATAC CGCACGCGAT CACAATGCCG TTTTGCTGGC GAACCATGGC CCGGTTGTCA GTGGTTCAAC GCTGCGAGAA GCGGTGTTCA ACGCGGAAGA ACTTGAAGAT ACGGCACGGC TCTATTTTCT GATAAAGCCT TATGATTACA GTCAATTAAC AACCTCATCC ATTGATGAGT TGGCTCAATC GTACCGCAAC AAAATAGGAT AA
|
Protein sequence | MNSPPFSEPP PSSEPPPASK LSPPAKQVPF SEQQVRDDLV NYARSLFQRG LSSGGSGNIS VKLPDGSFLV TPTNSCLGEL DSQTLSKLDA EGNHISGDKP SKEVPMHLAM YRARSTCGAV VHLHSPYLTA LSCLTNIDHT NCLPPITPYY VMRIGRLPLL SYMKPGDPAI ATALADTARD HNAVLLANHG PVVSGSTLRE AVFNAEELED TARLYFLIKP YDYSQLTTSS IDELAQSYRN KIG
|
| |