| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_2793 |
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| Symbol | |
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| ID | 6088768 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | - |
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| Start bp | 3083499 |
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| End bp | 3084206 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641597862 |
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| Product | 16S rRNA pseudouridylate synthase A |
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| Protein accession | YP_001721523 |
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| Protein GI | 170025018 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.863598 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCGATTGG ACAAGTTTTT ATCTCAGCAA TTAGGGGTCA GCCGGGCGTT GGTAGCGCGT
GAACTGCGGG CAAAGCGTGT GACTATTGAT GGCGAGGTGG TCAAAAGTGG TGCCATCAAG
CTGACACCAG AACAAGACGT GCGATTTGAT GGCAATCCGT TACAGCAGAT GGTTGGCCCC
CGTTATTTTA TGTTGAACAA ACCGCAGGGC TATGTGTGTT CGACGGAAGA TCCCGATCAT
CCAACGGTGT TGTATTTCCT TGATGAGCCA GTGGCTTACA AACTCCATGC CGCTGGGCGG
TTGGATATCG ATACTACCGG GTTGGTCTTG ATGACTGACG ATGGGCAGTG GTCACATCGT
GTCACTTCGC CACGTCATCA TTGTGAAAAG ACCTATTTGG TGACGTTGGA ACATCCGCTA
TCCGATGACA CCGCACAGCA ATTTGCTGAC GGTGTCCAAC TGCATAATGA AAAATCCCTG
ACCAAACCGG CTCAACTGGA CGTTATCGAG CCGCAACGGG TGCGTTTGAC CATCAGCGAA
GGGCGTTATC ATCAGGTGAA GCGGATGTTT GCTGCTGTGG GGAACCGAGT GATTGAGTTA
CATCGTGAAC GCATTGGTGA TATCACGCTT GATGATGATT TAGCCCCTGG TGAGTACCGG
CCGCTGACGG CAGAAGAGAT CGCCAGCGTG GGTGCCCCAC ACTTGTAA
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| Protein sequence | MRLDKFLSQQ LGVSRALVAR ELRAKRVTID GEVVKSGAIK LTPEQDVRFD GNPLQQMVGP
RYFMLNKPQG YVCSTEDPDH PTVLYFLDEP VAYKLHAAGR LDIDTTGLVL MTDDGQWSHR
VTSPRHHCEK TYLVTLEHPL SDDTAQQFAD GVQLHNEKSL TKPAQLDVIE PQRVRLTISE
GRYHQVKRMF AAVGNRVIEL HRERIGDITL DDDLAPGEYR PLTAEEIASV GAPHL
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