| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_2792 |
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| Symbol | |
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| ID | 6087727 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | - |
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| Start bp | 3082190 |
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| End bp | 3083395 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641597861 |
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| Product | bicyclomycin/multidrug efflux system |
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| Protein accession | YP_001721522 |
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| Protein GI | 170025017 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00710] drug resistance transporter, Bcr/CflA subfamily
[TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCAAAAAA ACCGGACATC CCACATTGGT TTGATTTTTA TCCTTGGGTT GTTGTCGATG
CTGATGCCTT TGGCGATTGA TATGTATCTG CCAAGCATGC CGATTATTGC GCAGGAGTTT
GGGGTCGAAA GTGGCCGTGT GCAGATGACG CTGAGCGCAT ATGTGCTGGG TTTTGCCATT
GGGCAAATGT TCTATGGGCC AATGGCTGAC AGCATCGGGC GTAAGCCGGT CATTTTTTGG
GGGACGCTGA TTTTTGCGCT TGCAGGTATG GCATGTGCGT TGGTGCAGTC GGTCGAGCAA
CTCATTAATA TGCGCTTCCT GCATGGCTTA TCCGCCGCCG CCGCAAGTGT GGTGATTAAT
GCCTTGATGC GCGATATGTT CACCAAAGAT GAGTTCTCCC GAATGATGTC TTTCGTGGTA
TTGGTGATGA CGATTGCCCC CTTGCTCGCA CCCATTATCG GTGGTGCACT GTTGGTGTGG
TTTAGCTGGC ATGCTATTTT CTGGACCATG GCGGGGGCGG CACTGGTTGG TGCGGTGTTA
GTGGCGCTGT TTATCCAAGA AACATTGCCT CCTGAACGGC GACAGAAATT TCATCTGCGC
ACGACCATAG GTAATTTTGG CTCGTTATTT CGCCACAAAC GCGTACTGAG CTATATGCTG
GCCAGTGGTT TCTCTTTTGC CGGTATGTTC TCATTCCTCA GCGCCGGTCC TTTTGTTTAT
ATCGATTTAA ACGGTGTTTC CCCGCAAAAC TTTGGTTATT ACTTTGCACT GAACATTGTC
TTTTTGTTCT TGATGACCTT TATCAACAGC CGTAATGTGC GCCGTTTCGG GGCGCTGAAA
ATGTTCCGTT TTGGCCTGAT AGTGCAATTT GTGATGGGGA TCTGGCTGGT AGTGGTTTGT
GTCGCTGGCC TAGGATTCTG GGCCTTAGTT CTGGGCGTAG CTGCCTATGT TGGGTGTATC
GCAATGATCA CGTCTAACGC GATGGCAGTG ATATTAGATG ATTTCCCGCA TATGGCAGGG
ACCGCCTCTT CTTTGGCGGG GACGTTGCGC TTTGGTATTG GTGCGGTGGT GGGGACGTTA
CTGTCGATGG CTTCGTCGCG CAGCGCCTGG CCAATGGTCA GTTCAATGGC ATTTTGTATT
ATTGTCGCGA TGTTGTTGTA TCTGTATGCC AGTCGCCCAG TCATAAAACC GTGTCATAAA
AAATAG
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| Protein sequence | MQKNRTSHIG LIFILGLLSM LMPLAIDMYL PSMPIIAQEF GVESGRVQMT LSAYVLGFAI
GQMFYGPMAD SIGRKPVIFW GTLIFALAGM ACALVQSVEQ LINMRFLHGL SAAAASVVIN
ALMRDMFTKD EFSRMMSFVV LVMTIAPLLA PIIGGALLVW FSWHAIFWTM AGAALVGAVL
VALFIQETLP PERRQKFHLR TTIGNFGSLF RHKRVLSYML ASGFSFAGMF SFLSAGPFVY
IDLNGVSPQN FGYYFALNIV FLFLMTFINS RNVRRFGALK MFRFGLIVQF VMGIWLVVVC
VAGLGFWALV LGVAAYVGCI AMITSNAMAV ILDDFPHMAG TASSLAGTLR FGIGAVVGTL
LSMASSRSAW PMVSSMAFCI IVAMLLYLYA SRPVIKPCHK K
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