| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_2785 |
|---|
| Symbol | |
|---|
| ID | 6088279 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis YPIII |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010465 |
|---|
| Strand | + |
|---|
| Start bp | 3073586 |
|---|
| End bp | 3075166 |
|---|
| Gene Length | 1581 bp |
|---|
| Protein Length | 526 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 641597854 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001721515 |
|---|
| Protein GI | 170025010 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2200] FOG: EAL domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGTTCAA ACAGTGCGTT CTCCCGCAAT ATTTTGTCCA GACGCCATCT GGTAAAAAAG
AGTATCCTCC TCGCGCTCTG CTTTTTTATC TGTTTTGTCG TTATAACGTT GTCATTACTG
TATCGCAGCA GTGAAAATAA ATTAACAACA CAAAGTGGTA ATATTATCAC CTATGCCTCT
CATTTCCTTA ATGAAATAAC AACGACCATG TCTCAGCTTA TCCCACTGAG CACCCAATCG
TGCGAACAAG CCAGCCCAAC TCTTCATTAT CGTGCCGCCT TTACCAATGG TGTCAGAGCC
TTTTTATTGG TCAGGGAAGG CGTTGCTTAT TGCTCCTCGG CAACGGGTGA AATGCACACG
CCAGTCAGTA CGATCTACCC CAAAGTTAAT TTATCCCAGC CACTGGATTT TAAAATTCAG
CAAGGCACCC CCATGATGCC AAACAAGCCT GCAATTGCCG TATGGCTGCG TCAAGCAGGC
CGTGGAGATA CGGGAATATT GGCGACGATG GAATTCAGTT TGCATCCCTA TCTATTAATG
GGCCGTTCAG ATAACGAAAT GAGTGGCTCA GCGATTATTA TTGATGGCTT AGCTATCACT
ACTTTTGATT CTAACGTCTT ACCTATCAGC CAGTTACCTA ATCTAAACGC CAGGGAGATT
ACATTACCTG GTTATCCGAT TAAGATATTG ATTTATCATA ATAGTATAAC GAAAAACGAT
ATTAGAATGA CCCTGTTAGG TGGCCTATTA CTTGCCGGCT TGGTGGGCAT CTTGGCTTAT
TATATTTTAA TCACCAAAAA AAGTGCTGAA GCTGAAATTT TACGGGGCAT TAGGCGCGGT
GAGTTTTTCG TTGAATATCA ACCGGTTTTT CGCTCACATA ATCAGACAAT ATCAGGTTTA
GAAGCCCTTA TCCGTTGGCA ACACCCGACT GAAGGGCGGA TTTCGCCCGA TATCTTCATT
CCTTATGCCG AAACTCAACA CCTGATACAG CCGCTGACAA CGCACTTGTT TGAGTTAATT
ATCAGAGATA CCGCTCTTAT GGTAAATCTG TTCCCGACGG GCGCTAAACT TGCCTTTAAT
ATTTCACCGG CCCATCTTGC TGATGATGAT TTTTGTCAGG ACGTATCACG ACTCTTGCAG
CAATTAAATA CCGATATTTT TACCCCCGTA TTCGAAATTA CTGAGCGAGG TATGGTGCAA
AAAGAGTTGG CCCTGAAGCA ATTCGCATGG CTGCATTCGC AAGGGATTCA AATCGCTGTC
GATGATTTTG GCACCGGCCA TAGCGCCCTG ATCTATTTAG AACGCTTTAC CTTAGATTAT
ATTAAAATTG ATCGCGGCTT TATCAGCACG ATAGGCGAAA ATACGGTGAC AACGCCGGTA
TTAGATTCGG TATTAATTCT GGCAAAAAAA CTTAATATTG AAACTATCGC TGAGGGCATC
GAGACTGAGC AACAACTTCA CTATTTAGCT AAACATGGTG TCAATTACTT GCAGGGTTAT
TTACTCAGTA AGCCGCTGTC TGTTGAAGCT TTAGCTAAAT TCTGTCATGA AAAGATGAGT
AACAAAAACT TACTGGCTTA A
|
|---|
| Protein sequence | MGSNSAFSRN ILSRRHLVKK SILLALCFFI CFVVITLSLL YRSSENKLTT QSGNIITYAS
HFLNEITTTM SQLIPLSTQS CEQASPTLHY RAAFTNGVRA FLLVREGVAY CSSATGEMHT
PVSTIYPKVN LSQPLDFKIQ QGTPMMPNKP AIAVWLRQAG RGDTGILATM EFSLHPYLLM
GRSDNEMSGS AIIIDGLAIT TFDSNVLPIS QLPNLNAREI TLPGYPIKIL IYHNSITKND
IRMTLLGGLL LAGLVGILAY YILITKKSAE AEILRGIRRG EFFVEYQPVF RSHNQTISGL
EALIRWQHPT EGRISPDIFI PYAETQHLIQ PLTTHLFELI IRDTALMVNL FPTGAKLAFN
ISPAHLADDD FCQDVSRLLQ QLNTDIFTPV FEITERGMVQ KELALKQFAW LHSQGIQIAV
DDFGTGHSAL IYLERFTLDY IKIDRGFIST IGENTVTTPV LDSVLILAKK LNIETIAEGI
ETEQQLHYLA KHGVNYLQGY LLSKPLSVEA LAKFCHEKMS NKNLLA
|
|---|
| |