| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_2782 |
|---|
| Symbol | |
|---|
| ID | 6088955 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis YPIII |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010465 |
|---|
| Strand | + |
|---|
| Start bp | 3070231 |
|---|
| End bp | 3071214 |
|---|
| Gene Length | 984 bp |
|---|
| Protein Length | 327 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 641597851 |
|---|
| Product | cobalamin synthesis protein P47K |
|---|
| Protein accession | YP_001721512 |
|---|
| Protein GI | 170025007 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0523] Putative GTPases (G3E family) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAAAGA CCAATTTAAT TACCGGGTTT TTAGGTTGTG GCAAAACCAC GACTATCCGG
CACTTACTCG CACAGAAGCC GGAACATGAA AAATGGGCGG TGCTGGTCAA TGAATTTGGT
GAGATTGGTA TTGATGGCGC TCTGTTGGCG GATAGCGGTG CTGTCTTAAA AGAGATCCCA
GGGGGCTGCA TGTGCTGTGT TAATGGGCTA CCGATGCAAA TTGGCCTGAA CATGCTGTTG
CAGCAGGCAA AACTAGATCG CCTGCTCATT GAGCCAACCG GGCTGGGCCA CCCGAAACAA
ATTCTGTCAT TATTAACGTC TGATATTTAT CAGCCTTGGA TTGACTTACG CGCCACACTT
TGTCTGCTGG ATGCCCGCCA ACTGAGTGAA CCCCGCTATA CCGAAAATGA AAATTTCCGT
GACCAACTGG CGGCGGCAGA TATCATTGTG GCCAACAAGC AAGACACTTA CCGCTCGGCC
GATAACGCGG TGTTACAACA ATGGCAACAA AAGCAGCCAT TATCGCGGCC GCTGTATCAT
AGCGAATATG GCAAACTCGA CGTGGCCCTG CTCGACCAAC CACACCGTAA TAAAGACGAA
CTTCCTTCTG GTACGCATCA TCACGGCACA TCACAGCCAA AAGGATTAGC CGCATTACGT
CTGAAAGGGG CCGAACCCTG GCGTCGGGCA TTAAATCGGG GGCAAGGGTA TCTGAGCTGC
GGCTGGGTAT TTGATGCCAA CACCGTTTTT GATACCGTGC CATTATTGGA GTGGGTACGA
TTGAACCCAG CAGAACGGGT AAAAGGTGTC ATGCGCATCC CGGAAGGAAC CTTGATGGTT
AATCGACAAG GTAATGACTT ACAAATAGAC ACTCGCCAAA TACCCCCGCT GGATAGCCGC
ATTGAATTGA TTAGCGCCAC TGATATTGAT TGGAACGTAT TGCAACATGA TTTATTAAAA
ATTCGTTTAC GTAACGGGGT ATGA
|
|---|
| Protein sequence | MTKTNLITGF LGCGKTTTIR HLLAQKPEHE KWAVLVNEFG EIGIDGALLA DSGAVLKEIP
GGCMCCVNGL PMQIGLNMLL QQAKLDRLLI EPTGLGHPKQ ILSLLTSDIY QPWIDLRATL
CLLDARQLSE PRYTENENFR DQLAAADIIV ANKQDTYRSA DNAVLQQWQQ KQPLSRPLYH
SEYGKLDVAL LDQPHRNKDE LPSGTHHHGT SQPKGLAALR LKGAEPWRRA LNRGQGYLSC
GWVFDANTVF DTVPLLEWVR LNPAERVKGV MRIPEGTLMV NRQGNDLQID TRQIPPLDSR
IELISATDID WNVLQHDLLK IRLRNGV
|
|---|
| |