| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_2751 |
|---|
| Symbol | |
|---|
| ID | 6089608 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis YPIII |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010465 |
|---|
| Strand | - |
|---|
| Start bp | 3034000 |
|---|
| End bp | 3035169 |
|---|
| Gene Length | 1170 bp |
|---|
| Protein Length | 389 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 641597820 |
|---|
| Product | periplasmic binding protein |
|---|
| Protein accession | YP_001721481 |
|---|
| Protein GI | 170024976 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.369256 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGAACAG GTAAGGGGTT TGGCGTGAAA TGTGTTTCAC TGAAAATGGC TAAAGGGTTA
ACTATCAGTT TGTTATTCGG CTGGGCCTTG ATGGCTGGCT CTAGTGCCTT GGCGGCAACA
GTGACTGACA TGGCTGGCCG TACGGTCACC ATACCGGCTA AAGTTGAGCG TATTTTACTG
GGTGAAGGGC GCTTGTTCTA TGCTGTCTCT TTATTGGAAG GTAATAAACC GTTAGACCGT
ATTGTTGGCT GGCAGGGCGA TTTTCGCAAA CTGGATCCCC AAACTTACGC CATCTATAAA
GCAAAATTCC CGCAAATTGA TCAAATCCCC CTTATTGGTA ACACGACCGC TGACAGTATC
AGCCCGGAAA AGGTGCTCAC CTTAAATCCG GATATCGCTA TTTTTGGTTT ATCTGGCCAT
GGTCCAGGTA AAGGCAGTGA ATTAGTCAAG CAACTAGAGA AAGCCGGTGT ACCGGTCGTT
TTCGTGGATT TCCGTAATTC GCCATTAAAG AACACGTTGC CAAGTATGCG CTTGCTGGGC
AAAGCCCTGC ACCGCGAGCA GCAAGCTGAA AACTACATTA ATTTTTATCA AGATAATGTG
GACAAGGTGA CCGATATCAC CAATAAAATC CCGGAAGATA AAAAACCGAG CGTATTTATT
GAATTACGTG CAGGGGCGTC GGAAGAGTGC TGTGGTACTG CCGGGAAGGG CAATATGGGC
GACTTTATCG ATCAGGCGGG CGGCAATAAT ATTGCTAAAA ATCTGCTGCC TGGCTCGCTA
GGTACGGTGA ATTTAGAAAA AGTATTGGCG GCGAAACCAG ATATCTACAT TGCCAGCGGG
GGCAAATCAC CAGGCAGCGA TGCACCGGGT GTCGTCCTTG GTGCGCAGGT AACGCCCGAG
CAGGCACAGG CCTCGTTGCA AAAAATTCTG GGCCGTAAGG GAATCAATAC CCTAAGTGCG
GTCAACACGG GTCATAGCTA TGCGATTTGG CACAATTACT ACAATTCACC GTATAACGTA
TTGGCAATTC AAAGCTTTGC CAAATGGTTC TATCCAGAGC AATTTGCTGA TCTCGATCCG
AAAAAAACCA TGGACAGCCT GTATTCACAG TTTCTAGCCG TCGAGCCAAG TGGCACCTAT
TGGATTGAAG CAAAAAGAGA GTTGGATTGA
|
|---|
| Protein sequence | MGTGKGFGVK CVSLKMAKGL TISLLFGWAL MAGSSALAAT VTDMAGRTVT IPAKVERILL
GEGRLFYAVS LLEGNKPLDR IVGWQGDFRK LDPQTYAIYK AKFPQIDQIP LIGNTTADSI
SPEKVLTLNP DIAIFGLSGH GPGKGSELVK QLEKAGVPVV FVDFRNSPLK NTLPSMRLLG
KALHREQQAE NYINFYQDNV DKVTDITNKI PEDKKPSVFI ELRAGASEEC CGTAGKGNMG
DFIDQAGGNN IAKNLLPGSL GTVNLEKVLA AKPDIYIASG GKSPGSDAPG VVLGAQVTPE
QAQASLQKIL GRKGINTLSA VNTGHSYAIW HNYYNSPYNV LAIQSFAKWF YPEQFADLDP
KKTMDSLYSQ FLAVEPSGTY WIEAKRELD
|
|---|
| |