Gene YPK_2741 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_2741 
Symbol 
ID6089549 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp3023950 
End bp3024621 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content51% 
IMG OID641597810 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001721471 
Protein GI170024966 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2011] ABC-type metal ion transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.396417 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAATG GCATGAGTTG GCAGGAATTA CTGGTATTAG TCGCTAATGC CAGCGGAGAA 
ACGATTTATA TGGTGATGAT CGCGACCTTT TTCACCGTAT TGATTGGTTT GCCATTGGGG
GTTTTACTGT TTGTCTCGCG ACCCGCAGGA GTGCTACCAG CACCACGGCT GAATACCTTG
ATTGGTGCAC TGGTCAATGT GGGGCGTTCA ATGCCTTTTG TGGTGTTACT CATCGCCTTA
ATCCCCATCA CCCGCTGGAT TATCGGTACC ACACTGGGCA GTACTGCGGC CATTGTCCCT
ATCACGTTAG GGGCGATCCC CTTCTTTGCG CGGGTCGTTG AGGCGGCATT GGACGAAGTC
GATAAAGGGC GCGTAGAAGC TATTTTATCC ATGGGTGGCT CTGCCCGCCA TGTCATCCAA
AAAGTGTTGT TGCCAGAGGC GCTGCCTGCA TTATTGGCAG GTATAACATT AACGGTAGTG
ATGCTGGTGG GATTCTCATC CATGGCTGGC GTGATCGGTG GTGGTGGGTT GGGTGATTTA
GCCATTCGCT ACGGCTATCA GCGCTTTAAT AATGAAGTGA TGGTCGCAAC ATTAGTGATA
CTGGTGATTT TAGTTCAAGG GATACAAAGC CTTGGCGATA GGTGGGTTAG GTCACTGGCA
CACCGCCGCT GA
 
Protein sequence
MKNGMSWQEL LVLVANASGE TIYMVMIATF FTVLIGLPLG VLLFVSRPAG VLPAPRLNTL 
IGALVNVGRS MPFVVLLIAL IPITRWIIGT TLGSTAAIVP ITLGAIPFFA RVVEAALDEV
DKGRVEAILS MGGSARHVIQ KVLLPEALPA LLAGITLTVV MLVGFSSMAG VIGGGGLGDL
AIRYGYQRFN NEVMVATLVI LVILVQGIQS LGDRWVRSLA HRR