| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_2724 |
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| Symbol | |
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| ID | 6089143 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | + |
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| Start bp | 3004683 |
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| End bp | 3005414 |
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| Gene Length | 732 bp |
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| Protein Length | 243 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641597793 |
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| Product | cationic amino acid ABC transporter, periplasmic binding protein |
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| Protein accession | YP_001721454 |
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| Protein GI | 170024949 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | [TIGR01096] lysine-arginine-ornithine-binding periplasmic protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00108182 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAT TACTATTGGC AACGTTATTA AGTGGCATGG TTTTCAGCGC TACCGCCGCA
GAGACCCTCC GTTTTGCAGC CTCAGCCACC TACCCGCCAT TTGAATCTAT GGATGCCAAT
AACGAAATCG TTGGCTTTGA TATGGATCTG GCAAAAGCAC TGTGTAAACA AATGGAAGCC
AACTGTACTT TCACTAATCA GGCTTTTGAT AGCCTGATCC CAGCGCTTAA ATTCAAACGT
TATGATGCCG TTATCTCTGG TATGGATATC ACGCCAGAAC GCAGTAAGCA GGTGGCATTC
ACTCAGCCTT ACTACGCTAA CTCCGCGATT GTTATCGCCC CGAAAGGTAA ATTCAGCACT
TTTGCTGACC TGAAAGGCAA AAAGATTGGG ATGGAGAATG GCACTACCCA TCAGAAATAT
TTACAGGATA AACATCCTGA AATTCAGACC GTGTCTTATG ACAGCTACCA GAATGCCATC
ATTGATCTGA AAAATGGCCG TATTGATGGT GTGTTTGGTG ATACTGCGGT AGTGAATGAA
TGGCTGAAAA CCAATCCTAA TTTAGCCTCT GTCGGCGAGC ATGTGACCGA CCCACAATAT
TTCGGCACCG GTTTAGGTAT TGCTGTGCGC CCGGATAACA TCGCCCTACT GACAAAATTG
AATAAAGCCA TTGATGCGGT GAAAGCTGAT GGTACTTATC AAGCGATCAA TGATAAGTGG
TTCCCTCAAT AA
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| Protein sequence | MKKLLLATLL SGMVFSATAA ETLRFAASAT YPPFESMDAN NEIVGFDMDL AKALCKQMEA
NCTFTNQAFD SLIPALKFKR YDAVISGMDI TPERSKQVAF TQPYYANSAI VIAPKGKFST
FADLKGKKIG MENGTTHQKY LQDKHPEIQT VSYDSYQNAI IDLKNGRIDG VFGDTAVVNE
WLKTNPNLAS VGEHVTDPQY FGTGLGIAVR PDNIALLTKL NKAIDAVKAD GTYQAINDKW
FPQ
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