Gene YPK_2718 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_2718 
Symbol 
ID6088731 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp2999573 
End bp3000358 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content52% 
IMG OID641597787 
ProductABC transporter related 
Protein accessionYP_001721448 
Protein GI170024943 
COG category[H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.083198 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCAAC TGACGTTAAA GCACGTCGGC GTCACGCTTC ATAAACGCCC ACTGCTCACC 
GATATTTCTC TAACGTGGCC TGCGGCACAG GTGAGCGGCA TTATTGGCCC CAATGGGGCG
GGCAAATCCA CGTTACTCAA AGCCATTAAC CACATGGTCC CCATTACCGG GCAGATCGAA
TATCAACAGT GCCCACTGAA TACGCGCGTC ACACGCATCG CCTATGTGTC CCAACTCAAT
CGTAGTGATT CTGCCCTGAC CGTTTTTGAA ATGGTCCTGC TGGGTAAAGT TCGCCAATTG
AGCTGGCGTG TCAGCCCCGC ACAAATTGAT GCGGTCGAGC AGGTATTGGC AGAGTGCGGC
ATTTCCTCTC TGGCAAACCA AGTTTTCAAC AGTCTAAGTG GCGGGCAACG CCAGTTAGTG
ATGCTCGCGC AGGCTTTCAT CGCTCAGCCG CAGATCATTT TGCTGGATGA ACCGACCAGC
GCCCTGGATA TTCACCACCA ATTACGTGTG CTGCAAAAAA TCGTCGATTA CAGCAAACGC
CACCAATGCA CCACATTAAT GGTGATCCAC GATCTGGGCT TGGCGCTGCG CTTTTGCCAA
ACGCTCACGT TAATCCACCG TGGAAATGTT GCCTGTCATG GCGCAGCCCA TCAGGTGATC
GCGGACCCCA TGATGTCCAC CGTATTTGGT GTGGGTATCG AAAGTGGAAC AAGCCCTTTG
GGCTATCGCT ACTTATTGCC CACTCAGTTC TTACCTACTC ATGGAGAGAA AATATGTATA
CGTTGA
 
Protein sequence
MTQLTLKHVG VTLHKRPLLT DISLTWPAAQ VSGIIGPNGA GKSTLLKAIN HMVPITGQIE 
YQQCPLNTRV TRIAYVSQLN RSDSALTVFE MVLLGKVRQL SWRVSPAQID AVEQVLAECG
ISSLANQVFN SLSGGQRQLV MLAQAFIAQP QIILLDEPTS ALDIHHQLRV LQKIVDYSKR
HQCTTLMVIH DLGLALRFCQ TLTLIHRGNV ACHGAAHQVI ADPMMSTVFG VGIESGTSPL
GYRYLLPTQF LPTHGEKICI R