| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_2702 |
|---|
| Symbol | |
|---|
| ID | 6088645 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis YPIII |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010465 |
|---|
| Strand | + |
|---|
| Start bp | 2984862 |
|---|
| End bp | 2985884 |
|---|
| Gene Length | 1023 bp |
|---|
| Protein Length | 340 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 641597771 |
|---|
| Product | HCP oxidoreductase, NADH-dependent |
|---|
| Protein accession | YP_001721432 |
|---|
| Protein GI | 170024927 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0633] Ferredoxin
[COG1018] Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 42 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGATT TTATTCCAAC CGATTCCCCT ACCCCCTTCT GCCCTAACCG TATGCAGGTC
CATTCCATCG TGCAAGAGAC GCCCGATGTC TGGAGCCTAC GGCTGATTAA TCACGATTTT
TACTCTTATT TGCCGGGCCA ATACGCGTTG GTGAGTATTC GCAACAGTGA TGAAACCTTG
CGCGCCTATA CCCTCTCCTC GACACCGGGT TTAAGCCCTT TTATCCAACT CACCGTGCGC
TGTTTACCTG ATGGTGAAGG CTCCCGCTGG CTGACGCAGC AGGTTAATGT CGGGGATTAT
CTGTGGCTTT CTGATGCTCA GGGCGAGTTT ACCTGCGCCA ATGCCGATGA TGACCACTAT
CTGATGCTGG CGGCGGGCTG TGGCGTCACA CCCGTAATAT CAATGTGTCG CGCACTACTG
GCTCAGCGCC CACAGGCCGA TATTCGGGTA ATTTTTAATG TCCGCACCCC TGCCGATGTC
ATTTTTGCCA ATGAATGGCA CACCTTATTG CAGCGCTATC CACAGCAATT AAAACTCACG
CTGATGGCAG AGTCAGCGGC AACGGCGGGG TTTATTGAGG GGCGAATTAA TGCCCGTATT
ATGCAGCAGG TCGCCCCCGA CATTGCTCAT CGCCGCGTGA TGACTTGCGG GCCTGCGCCC
TATATGGCGT GGGTTGAACA GTATTGCCAA CAACAGCAAG TGCCTGCCGA TCATTTCCAG
CAAGAGCAAT TTCGTACCGC TGATGAGGTT ATCGATACCA GTAATGAATT GACGATGACT
ATCAGCCGCC CGCTACGCAG TGTCAACGTC CCGGTTGGCA CCTCCCTGCT CTTTGCGCTG
GAACAACATA AAATACCGGT TATGGCCGCC TGCCGCGCGG GTGTTTGTGG CTCATGTAAA
ACCCACATTT TGCATGGCAA ATACACCACC ACCAGCACCA TGACGCTAAC GCCGGAAGAA
ATAGCGCAAG GTTATGTTCT GGCATGCAGT TGCCAACTTC AGGGGGATGT CCAATTGGCG
TGA
|
|---|
| Protein sequence | MTDFIPTDSP TPFCPNRMQV HSIVQETPDV WSLRLINHDF YSYLPGQYAL VSIRNSDETL
RAYTLSSTPG LSPFIQLTVR CLPDGEGSRW LTQQVNVGDY LWLSDAQGEF TCANADDDHY
LMLAAGCGVT PVISMCRALL AQRPQADIRV IFNVRTPADV IFANEWHTLL QRYPQQLKLT
LMAESAATAG FIEGRINARI MQQVAPDIAH RRVMTCGPAP YMAWVEQYCQ QQQVPADHFQ
QEQFRTADEV IDTSNELTMT ISRPLRSVNV PVGTSLLFAL EQHKIPVMAA CRAGVCGSCK
THILHGKYTT TSTMTLTPEE IAQGYVLACS CQLQGDVQLA
|
|---|
| |