| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_2694 |
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| Symbol | |
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| ID | 6088556 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | + |
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| Start bp | 2975054 |
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| End bp | 2975317 |
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| Gene Length | 264 bp |
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| Protein Length | 87 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641597763 |
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| Product | cold-shock DNA-binding domain-containing protein |
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| Protein accession | YP_001721424 |
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| Protein GI | 170024919 |
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| COG category | [K] Transcription |
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| COG ID | [COG1278] Cold shock proteins |
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| TIGRFAM ID | [TIGR02381] cold shock domain protein CspD |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.251619 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAGACGG GTACTGTTAA ATGGTTCAAC AACGCCAAAG GTTTTGGCTT TATTTGCCCT
GAGGGCGGTG GCGAAGACAT TTTCGCTCAC TATTCAACTA TCCAGATGGA TGGTTACCGA
ACATTAAAAG CCGGCCAAAT AGTTAACTTT GATGTTCATG AAGGCCCCAA AGGGAACCAT
GCTAGCCTGA TTGTTCCGCT AGAGTTAAAT AGTGTACCAC CGTTAGACGG TGTATCACCG
CCGGAACTCG CTATACTGGC CTGA
|
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| Protein sequence | METGTVKWFN NAKGFGFICP EGGGEDIFAH YSTIQMDGYR TLKAGQIVNF DVHEGPKGNH
ASLIVPLELN SVPPLDGVSP PELAILA
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