Gene YPK_2692 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_2692 
SymbolclpA 
ID6088557 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp2972071 
End bp2974347 
Gene Length2277 bp 
Protein Length758 aa 
Translation table11 
GC content49% 
IMG OID641597761 
ProductATP-dependent Clp protease ATP-binding subunit 
Protein accessionYP_001721422 
Protein GI170024917 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0542] ATPases with chaperone activity, ATP-binding subunit 
TIGRFAM ID[TIGR02639] ATP-dependent Clp protease ATP-binding subunit clpA 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000885828 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCAATC AAGAACTTGA ACTCAGTCTT AATATGGCTT TCGCCAGAGC GCGTGAGCAC 
AGACACGAGT TTATGACCGT GGAGCACCTG TTGCTGGCAT TGCTGAGCAA TCCAGCCGCG
CGGGAAGCGT TGGAGGCCTG TACGGTTGAC CTGGTGGCGT TACGCCAGGA ATTAGAAGCG
TTTATCGAAC AAACTACACC GACACTACCT GTCAGTGAGG AAGAGCGTGA TACCCAGCCA
ACGCTCAGTT TTCAGCGCGT ACTACAACGT GCGGTCTTTC ATGTGCAGTC ATCGGGCCGT
AATGAGGTTT CCGGCGCGAA CGTGTTGGTC GCCATCTTCA GTGAACAAGA GTCTCAGGCG
GCCTACCTGT TGCGTAAGCA TGATGTCAGC CGCTTGGATG TCGTGAACTT TATTTCCCAT
GGTGCCCGTA AGGACGAGCC TAGCCAGACG CCGAATGTCG ATAACTCGCC AAGTGAAGAG
CAGGCCAGCG GGGAAGACCG TATGGAAAAC TTCACCACAA ACCTAAATCA ACTGGCCCGT
GTTGGCGGCA TTGATCCGCT TATTGGGCGC GATAAAGAGC TGGAGCGGAC CATTCAGGTA
CTGTGCCGTC GGCGTAAAAA CAACCCGCTG CTGGTGGGGG AATCCGGTGT TGGTAAAACT
GCCATTGCTG AGGGGCTGGC TTGGCGTATT GTGCAAGGTG ATGTTCCTGA CGTCATATCC
GAATGCACGC TGTACTCATT GGATATCGGT TCATTGCTGG CGGGTACCAA ATACCGTGGT
GACTTTGAAA AACGGTTTAA GGCACTGCTA AAGCAGTTGG AAAACGACAA AGACAGCATC
CTGTTTATCG ATGAAATCCA CACAATCATT GGCGCTGGTG CGGCTTCTGG TGGTCAGGTG
GATGCCGCGA ATCTGATTAA ACCTCTGCTT TCCAGTGGCA AGATCCGGGT TATTGGTTCC
ACGACGTATC AGGAATTCAG TAATATCTTT GAGAAAGATC GCGCGCTGGC ACGTCGTTTC
CAGAAAATTG ATATCATTGA ACCAACACCA GAAGAGACGG TTCAAATTAT TAATGGTCTG
AAACCCAAAT ATGAAGCGCA CCACGATGTG CGTTACACCG CGAAAGCGAT ACGTGCTGCG
GTTGAATTGT CGGTTAAATA TATTAATGAC CGCCATTTGC CAGACAAAGC CATTGATGTC
ATTGATGAAG CAGGTGCGCG TAGCCGCCTG ATGCCAGTGA ATAAACGCAA GAAAACGGTC
AATGTCTCGG ATATCGAATC GGTGGTAGCC CGTATTGCCC GTATCCCGGA GAAAACGGTT
TCTGCCAGTG ACCGCGATGT CCTACGAAAT CTGAGTGATC GCCTAAACAT GTTGGTATTC
GGTCAAGATA AGGCGATTGA GGCGTTATCT GAAGCGATCA AAATGAGCCG TGCGGGGTTA
GGGCATGAGC GTCAACCTGT CGGGTCCTTC TTGTTTGCTG GCCCTACGGG GGTAGGTAAA
ACAGAAGTGA CGGTGCAGTT GGCCAAAGCG CTCGATATCG AATTGCTCCG CTTTGATATG
TCTGAGTATA TGGAGCGCCA TACTGTCAGC CGCCTGATTG GTGCGCCCCC AGGGTATGTT
GGTTACGATC AGGGCGGGTT ATTGACTGAT TCAGTGATCA AACATCCTCA TGCTGTGTTG
TTATTGGACG AAATTGAAAA AGCGCATCCT GATGTGTTTA ATCTGTTATT GCAGGTGATG
GATAACGGAA CACTGACTGA TAACAATGGG CGTAAGGCCG ATTTCCGTAA CGTCATTTTG
GTGATGACCA CCAACGCCGG TGTACGGGAA ACGCAGCGCA CTTCCATTGG TTTTAAACAG
CAGGATAACA GCACTGATGC GCTGGAAGAG ATCAAAAAAA TATTCACACC GGAGTTCCGT
AACCGGTTAG ATAATATTAT TTGGTTCAAC CATTTGTCTC CTGCGGTTAT CCAGCAGGTG
GTCGATAAAT TTATCGTTGA GTTGCAGGCA CAATTAGATG CGAAAGGCGT GTCATTGGAG
GTCAGTGATG AAGCGCGCGA TTGGTTATCT GAGAAGGGCT ATGACAAAGC GATGGGTGCT
CGACCAATGA CCCGGGTGAT TCAGGAGAAT CTGAAGAAAC CACTGGCGAA TGAATTGTTA
TTTGGTTCTC TGGTTGATGG TGGTTCGGTT ACGGTTAATC TGGATAAAGA GAAACAACAA
CTGGCCTATG AATTCCAGAG CGCGCAAAAA CGTAAAACTG AAGGGGCAGT TCATTAA
 
Protein sequence
MLNQELELSL NMAFARAREH RHEFMTVEHL LLALLSNPAA REALEACTVD LVALRQELEA 
FIEQTTPTLP VSEEERDTQP TLSFQRVLQR AVFHVQSSGR NEVSGANVLV AIFSEQESQA
AYLLRKHDVS RLDVVNFISH GARKDEPSQT PNVDNSPSEE QASGEDRMEN FTTNLNQLAR
VGGIDPLIGR DKELERTIQV LCRRRKNNPL LVGESGVGKT AIAEGLAWRI VQGDVPDVIS
ECTLYSLDIG SLLAGTKYRG DFEKRFKALL KQLENDKDSI LFIDEIHTII GAGAASGGQV
DAANLIKPLL SSGKIRVIGS TTYQEFSNIF EKDRALARRF QKIDIIEPTP EETVQIINGL
KPKYEAHHDV RYTAKAIRAA VELSVKYIND RHLPDKAIDV IDEAGARSRL MPVNKRKKTV
NVSDIESVVA RIARIPEKTV SASDRDVLRN LSDRLNMLVF GQDKAIEALS EAIKMSRAGL
GHERQPVGSF LFAGPTGVGK TEVTVQLAKA LDIELLRFDM SEYMERHTVS RLIGAPPGYV
GYDQGGLLTD SVIKHPHAVL LLDEIEKAHP DVFNLLLQVM DNGTLTDNNG RKADFRNVIL
VMTTNAGVRE TQRTSIGFKQ QDNSTDALEE IKKIFTPEFR NRLDNIIWFN HLSPAVIQQV
VDKFIVELQA QLDAKGVSLE VSDEARDWLS EKGYDKAMGA RPMTRVIQEN LKKPLANELL
FGSLVDGGSV TVNLDKEKQQ LAYEFQSAQK RKTEGAVH