Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_2692 |
Symbol | clpA |
ID | 6088557 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 2972071 |
End bp | 2974347 |
Gene Length | 2277 bp |
Protein Length | 758 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641597761 |
Product | ATP-dependent Clp protease ATP-binding subunit |
Protein accession | YP_001721422 |
Protein GI | 170024917 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
TIGRFAM ID | [TIGR02639] ATP-dependent Clp protease ATP-binding subunit clpA |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000885828 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTCAATC AAGAACTTGA ACTCAGTCTT AATATGGCTT TCGCCAGAGC GCGTGAGCAC AGACACGAGT TTATGACCGT GGAGCACCTG TTGCTGGCAT TGCTGAGCAA TCCAGCCGCG CGGGAAGCGT TGGAGGCCTG TACGGTTGAC CTGGTGGCGT TACGCCAGGA ATTAGAAGCG TTTATCGAAC AAACTACACC GACACTACCT GTCAGTGAGG AAGAGCGTGA TACCCAGCCA ACGCTCAGTT TTCAGCGCGT ACTACAACGT GCGGTCTTTC ATGTGCAGTC ATCGGGCCGT AATGAGGTTT CCGGCGCGAA CGTGTTGGTC GCCATCTTCA GTGAACAAGA GTCTCAGGCG GCCTACCTGT TGCGTAAGCA TGATGTCAGC CGCTTGGATG TCGTGAACTT TATTTCCCAT GGTGCCCGTA AGGACGAGCC TAGCCAGACG CCGAATGTCG ATAACTCGCC AAGTGAAGAG CAGGCCAGCG GGGAAGACCG TATGGAAAAC TTCACCACAA ACCTAAATCA ACTGGCCCGT GTTGGCGGCA TTGATCCGCT TATTGGGCGC GATAAAGAGC TGGAGCGGAC CATTCAGGTA CTGTGCCGTC GGCGTAAAAA CAACCCGCTG CTGGTGGGGG AATCCGGTGT TGGTAAAACT GCCATTGCTG AGGGGCTGGC TTGGCGTATT GTGCAAGGTG ATGTTCCTGA CGTCATATCC GAATGCACGC TGTACTCATT GGATATCGGT TCATTGCTGG CGGGTACCAA ATACCGTGGT GACTTTGAAA AACGGTTTAA GGCACTGCTA AAGCAGTTGG AAAACGACAA AGACAGCATC CTGTTTATCG ATGAAATCCA CACAATCATT GGCGCTGGTG CGGCTTCTGG TGGTCAGGTG GATGCCGCGA ATCTGATTAA ACCTCTGCTT TCCAGTGGCA AGATCCGGGT TATTGGTTCC ACGACGTATC AGGAATTCAG TAATATCTTT GAGAAAGATC GCGCGCTGGC ACGTCGTTTC CAGAAAATTG ATATCATTGA ACCAACACCA GAAGAGACGG TTCAAATTAT TAATGGTCTG AAACCCAAAT ATGAAGCGCA CCACGATGTG CGTTACACCG CGAAAGCGAT ACGTGCTGCG GTTGAATTGT CGGTTAAATA TATTAATGAC CGCCATTTGC CAGACAAAGC CATTGATGTC ATTGATGAAG CAGGTGCGCG TAGCCGCCTG ATGCCAGTGA ATAAACGCAA GAAAACGGTC AATGTCTCGG ATATCGAATC GGTGGTAGCC CGTATTGCCC GTATCCCGGA GAAAACGGTT TCTGCCAGTG ACCGCGATGT CCTACGAAAT CTGAGTGATC GCCTAAACAT GTTGGTATTC GGTCAAGATA AGGCGATTGA GGCGTTATCT GAAGCGATCA AAATGAGCCG TGCGGGGTTA GGGCATGAGC GTCAACCTGT CGGGTCCTTC TTGTTTGCTG GCCCTACGGG GGTAGGTAAA ACAGAAGTGA CGGTGCAGTT GGCCAAAGCG CTCGATATCG AATTGCTCCG CTTTGATATG TCTGAGTATA TGGAGCGCCA TACTGTCAGC CGCCTGATTG GTGCGCCCCC AGGGTATGTT GGTTACGATC AGGGCGGGTT ATTGACTGAT TCAGTGATCA AACATCCTCA TGCTGTGTTG TTATTGGACG AAATTGAAAA AGCGCATCCT GATGTGTTTA ATCTGTTATT GCAGGTGATG GATAACGGAA CACTGACTGA TAACAATGGG CGTAAGGCCG ATTTCCGTAA CGTCATTTTG GTGATGACCA CCAACGCCGG TGTACGGGAA ACGCAGCGCA CTTCCATTGG TTTTAAACAG CAGGATAACA GCACTGATGC GCTGGAAGAG ATCAAAAAAA TATTCACACC GGAGTTCCGT AACCGGTTAG ATAATATTAT TTGGTTCAAC CATTTGTCTC CTGCGGTTAT CCAGCAGGTG GTCGATAAAT TTATCGTTGA GTTGCAGGCA CAATTAGATG CGAAAGGCGT GTCATTGGAG GTCAGTGATG AAGCGCGCGA TTGGTTATCT GAGAAGGGCT ATGACAAAGC GATGGGTGCT CGACCAATGA CCCGGGTGAT TCAGGAGAAT CTGAAGAAAC CACTGGCGAA TGAATTGTTA TTTGGTTCTC TGGTTGATGG TGGTTCGGTT ACGGTTAATC TGGATAAAGA GAAACAACAA CTGGCCTATG AATTCCAGAG CGCGCAAAAA CGTAAAACTG AAGGGGCAGT TCATTAA
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Protein sequence | MLNQELELSL NMAFARAREH RHEFMTVEHL LLALLSNPAA REALEACTVD LVALRQELEA FIEQTTPTLP VSEEERDTQP TLSFQRVLQR AVFHVQSSGR NEVSGANVLV AIFSEQESQA AYLLRKHDVS RLDVVNFISH GARKDEPSQT PNVDNSPSEE QASGEDRMEN FTTNLNQLAR VGGIDPLIGR DKELERTIQV LCRRRKNNPL LVGESGVGKT AIAEGLAWRI VQGDVPDVIS ECTLYSLDIG SLLAGTKYRG DFEKRFKALL KQLENDKDSI LFIDEIHTII GAGAASGGQV DAANLIKPLL SSGKIRVIGS TTYQEFSNIF EKDRALARRF QKIDIIEPTP EETVQIINGL KPKYEAHHDV RYTAKAIRAA VELSVKYIND RHLPDKAIDV IDEAGARSRL MPVNKRKKTV NVSDIESVVA RIARIPEKTV SASDRDVLRN LSDRLNMLVF GQDKAIEALS EAIKMSRAGL GHERQPVGSF LFAGPTGVGK TEVTVQLAKA LDIELLRFDM SEYMERHTVS RLIGAPPGYV GYDQGGLLTD SVIKHPHAVL LLDEIEKAHP DVFNLLLQVM DNGTLTDNNG RKADFRNVIL VMTTNAGVRE TQRTSIGFKQ QDNSTDALEE IKKIFTPEFR NRLDNIIWFN HLSPAVIQQV VDKFIVELQA QLDAKGVSLE VSDEARDWLS EKGYDKAMGA RPMTRVIQEN LKKPLANELL FGSLVDGGSV TVNLDKEKQQ LAYEFQSAQK RKTEGAVH
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