Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_2683 |
Symbol | |
ID | 6087309 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 2957977 |
End bp | 2959311 |
Gene Length | 1335 bp |
Protein Length | 444 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641597752 |
Product | recombination factor protein RarA |
Protein accession | YP_001721413 |
Protein GI | 170024908 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2256] ATPase related to the helicase subunit of the Holliday junction resolvase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.826715 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCCTCG ATTTTTCCCA AAATGAGTTT CAACCACTGG CCGCGCGTAT GCGGCCTTTG ACGTTGGATC AATATATTGG TCAGCAACAT TTGCTGGCAC CGGGTAAGCC GCTACCGCGG GCAATCGTTG CCGGGCAGTT ACACTCCATG ATCCTCTGGG GGCCGCCGGG AACCGGTAAA ACAACATTGG CAGAAATTAT TGGCCGCTAC GGTCAAGCCG ATGTTGAGCG GATTTCTGCG GTGACCTCCG GTATTAAGGA GATTCGCGAG GCTATCGAGC GGGCGCGGCA AAACCGTGAT GCTGGCCGGC GGACTATCTT GTTTGTTGAT GAAGTTCATC GTTTCAATAA GAGCCAGCAG GATGCATTTC TACCCCATAT TGAAGATGGC ACCATCACTT TTATTGGTGC TACAACAGAG AACCCCTCCT TTGAACTAAA TTCTGCATTG CTCTCGCGAG CCAGAGTCTA TTTGCTCAAG GCACTAACCG CAGCAGATAT CGAGAAGGTG ATTGACCAGG CGATGTCTGA TAGCAGTCGA GGTTACGGCG GGCAGAATAT TTTACTGCCT GATGAAACTC GCCGCATGAT GTCTGAGCTC GTCGGCGGGG ATGCTCGGCG GGCGTTGAAT AGCCTGGAAA TGATGGCTGA CATGGCTGAA ATAGATGCCA GTGGCGTCCG TGTGTTGACG CCAGAATTGC TGAAAGAGGT CTCTGGTGAG CGTAGCGCCC GTTTTGATAA CAAAGGCGAC CGTTATTACG ATTTGATCTC GGCGGTACAT AAATCTATTC GTGGTTCGGC ACCGGATGCG GCGCTGTACT GGTATGCACG CATTATCACC GCGGGGGGCG ATCCGCTCTA TGTTGCCCGG CGTTTGTTGG CTATCGCATC GGAAGATGTT GGTAACGCCG ATCCACGTGC GATGCAGGTG GCGATATCGG CCTGGGATTG CTTTACCCGT GTGGGGCCAG CCGAAGGGGA GCGGGCGATT GCCCAGGCAA TTGTTTATTT AGCCTGCGCG CCTAAAAGTA ACGCGGTGTA TGCTGCATTT AAAGCCGCGA TGCAGGATGC TCGCGATAAG CCCGATTTCG ATGTTCCAGA GCATTTGCGC AATGCGCCGA CTAAACTGAT GAAAGAGATG GGGCTTGGCG CTGAGTATCG CTATGCCCAT GATGAGCAGC ACGCCTATGC TGCAGGTGAA AATTATTTTC CACCTGAAAT GGCGGCGACC CGCTACTATT TGCCAACATC TCGTGGTCTG GAGGGTAAAA TCGGTGAGAA GCTGGCATGG TTAGCTGAAC AGGATAAAAA TAGCCCGATA AAACGCTACC GCTAG
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Protein sequence | MSLDFSQNEF QPLAARMRPL TLDQYIGQQH LLAPGKPLPR AIVAGQLHSM ILWGPPGTGK TTLAEIIGRY GQADVERISA VTSGIKEIRE AIERARQNRD AGRRTILFVD EVHRFNKSQQ DAFLPHIEDG TITFIGATTE NPSFELNSAL LSRARVYLLK ALTAADIEKV IDQAMSDSSR GYGGQNILLP DETRRMMSEL VGGDARRALN SLEMMADMAE IDASGVRVLT PELLKEVSGE RSARFDNKGD RYYDLISAVH KSIRGSAPDA ALYWYARIIT AGGDPLYVAR RLLAIASEDV GNADPRAMQV AISAWDCFTR VGPAEGERAI AQAIVYLACA PKSNAVYAAF KAAMQDARDK PDFDVPEHLR NAPTKLMKEM GLGAEYRYAH DEQHAYAAGE NYFPPEMAAT RYYLPTSRGL EGKIGEKLAW LAEQDKNSPI KRYR
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