| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_2668 |
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| Symbol | rpsA |
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| ID | 6088809 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | - |
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| Start bp | 2936501 |
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| End bp | 2938174 |
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| Gene Length | 1674 bp |
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| Protein Length | 557 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641597737 |
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| Product | 30S ribosomal protein S1 |
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| Protein accession | YP_001721398 |
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| Protein GI | 170024893 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0539] Ribosomal protein S1 |
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| TIGRFAM ID | [TIGR00717] ribosomal protein S1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000112537 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAGAAT CTTTTGCTCA ACTCTTTGAA GAATCCCTGA AAACAATTGA AACACGTCCG
GGCTCTATCG TCCGTGGTGT TGTTGTTTCT ATCGATAAAG ATATCGTACT GGTTGACGCT
GGTCTGAAAT CTGAGTCAGC AATTCCAGCA GAACAGTTCA AGAACGCGCA AGGCGAACTG
GAAATTCAAG TTGGTGACGA AGTTGATGTT GCTCTGGACG CTGTTGAAGA CGGCTTCGGT
GAAACTCTGC TGTCCCGTGA GAAAGCTAAG CGTCACGAAG CATGGCTGAT GCTGGAAAAA
GCTTACGAAG AAGCTGCAAC CGTTACTGGT GTGATCAACG GCAAAGTGAA GGGCGGCTTT
ACAGTCGAAC TGAACGGTAT CCGTGCGTTC CTGCCTGGTT CACTGGTTGA TGTGCGTCCA
GTTCGCGATA CTCTGCATCT GGAAGGCAAA GAGCTTGAGT TCAAAGTCAT CAAGCTGGAT
CAGAAACGCA ACAACGTCGT TGTTTCTCGT CGTGCAGTTA TCGAATCCGA GAACAGCGCT
GAGCGTGATC AACTGCTGGA AAACCTGCAA GAAGGCATGG AAGTCAAGGG TATCGTTAAG
AACCTGACTG ACTACGGTGC ATTCGTTGAC CTGGGTGGCG TTGATGGCTT GCTGCACATC
ACTGACATGG CTTGGAAACG TGTTAAACAC CCAAGCGAAA TCGTCAATGT GGGCGACGAA
ATCACTGTTA AAGTTCTGAA ATTCGACCGC GAACGTACTC GTGTATCCCT TGGCTTGAAA
CAACTGGGCG AAGATCCATG GGTTGCTATC GCTAAACGTT ACCCAGAAAG CACTAAGCTG
ACTGGTCGTG TGACTAACCT GACTGATTAC GGTTGCTTCG TAGAAATCGA AGAAGGCGTT
GAAGGTTTGG TACACGTTTC AGAAATGGAT TGGACCAACA AAAACATTCA CCCGTCTAAA
GTTGTTAACG TTGGCGACGT AGTGGAAGTT ATGGTTCTGG ACATCGATGA AGAACGTCGT
CGTATTTCTC TGGGCCTGAA ACAGTGCAAA TCTAACCCAT GGCAGCTGTT TGCAGAAACC
CACAACAAAA ACGACCGCGT TGAAGGTAAA ATCAAGTCTA TCACTGACTT CGGTATCTTC
ATCGGCTTGG ACGGCGGCAT CGACGGCCTG GTTCACCTGT CTGATATCTC CTGGAACGTT
GCAGGCGAAG AAGCAGTTCG TGAATACAAG AAAGGCGACG AAATCGCAGC TGTGGTTCTG
CAGGTTGACG CAGAACGTGA GCGTATCTCC TTAGGCGTGA AACAACTGGC AGAAGACCCG
TTCAATAACT ACCTGTCTGT TAACAAGAAA GGTGCTATTG TTACTGGTAA AGTAACTGCA
GTTGACGCTA AAGGTGCTAC AGTTGAATTG GCTGGCGGCG TAGAAGGTTA TCTGCGTGCT
TCCGAAGCAA CTCGTGACCG CGTTGAAGAT GCGACGCTGG TTCTGAACGT AGGTGATGAA
GTTGAAGCCA AATATACTGG CGTTGACCGT AAAAACCGCG TAATCAGCCT GTCTGTTCGT
GCTAAAGACG AAGCTGATGA GAAAGATGCT ATTGCTACGG TTAACACCAA GCCAGAAGAA
AGTAATTTCT CTAGCGCAAT GGCTGAAGCG TTCAAAGCTG CGAAAGGCGA GTAA
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| Protein sequence | MIESFAQLFE ESLKTIETRP GSIVRGVVVS IDKDIVLVDA GLKSESAIPA EQFKNAQGEL
EIQVGDEVDV ALDAVEDGFG ETLLSREKAK RHEAWLMLEK AYEEAATVTG VINGKVKGGF
TVELNGIRAF LPGSLVDVRP VRDTLHLEGK ELEFKVIKLD QKRNNVVVSR RAVIESENSA
ERDQLLENLQ EGMEVKGIVK NLTDYGAFVD LGGVDGLLHI TDMAWKRVKH PSEIVNVGDE
ITVKVLKFDR ERTRVSLGLK QLGEDPWVAI AKRYPESTKL TGRVTNLTDY GCFVEIEEGV
EGLVHVSEMD WTNKNIHPSK VVNVGDVVEV MVLDIDEERR RISLGLKQCK SNPWQLFAET
HNKNDRVEGK IKSITDFGIF IGLDGGIDGL VHLSDISWNV AGEEAVREYK KGDEIAAVVL
QVDAERERIS LGVKQLAEDP FNNYLSVNKK GAIVTGKVTA VDAKGATVEL AGGVEGYLRA
SEATRDRVED ATLVLNVGDE VEAKYTGVDR KNRVISLSVR AKDEADEKDA IATVNTKPEE
SNFSSAMAEA FKAAKGE
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