| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_2665 |
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| Symbol | |
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| ID | 6088336 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | - |
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| Start bp | 2931548 |
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| End bp | 2933296 |
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| Gene Length | 1749 bp |
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| Protein Length | 582 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641597734 |
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| Product | lipid transporter ATP-binding/permease protein |
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| Protein accession | YP_001721395 |
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| Protein GI | 170024890 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | [TIGR02203] lipid A export permease/ATP-binding protein MsbA |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.789085 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGAATG ATAAAGATCT ATCCACTTGG CAGACCTTTC GTCGCCTATG GCCGACGATC
TCCCCTTATA AGGCCGGTCT TATCGTTGCG GCGATAGCAT TAATCCTTAA TGCGGCCAGT
GATACTTTTA TGCTGTCGTT ACTGAAACCC TTGCTAGACG ATGGGTTTGG CAATTCGAAC
AGTTCAATTC TGAAATGGAT GCCTTTGGCT GTTATCGGCC TGATGGTAGT GCGTGGCGTG
ACTGGTTTTG TCTCAAGCTA CTGTATTTCT TGGGTGTCGG GTAAAGTTGT AATGCATATC
CGCCGCCGCT TATTCAGCCA TATGATGGGT ATGCCTGTTT CTTTCTTTGA CCAACAATCG
ACGGGTACCT TATTGTCGCG CATTACTTAC GACTCTGAGC AGGTAGCTGC GTCCTCCTCC
AGTGCGTTGG TGACTGTGGT GCGGGAAGGG GCCTCTATCA TTGGCTTGTT CATTATGATG
TTTTATTACA GTTGGCAGTT GTCGCTGATT TTAATCGTCA TTGCACCCAT TGTGTCTATT
TCGATCCGTC TGGTATCCAA ACGTTTTCGT AATATCAGTA AGAATATGCA AAATACTATG
GGGGAAGTGA CCACCAGCGC TGAGCAAATG CTCAAAGGGC ATAAAGAAGT TTTGATCTTT
GGTGGCCAGA AGGTTGAAAC CGAGCGCTTT GATGCTGTCA GTAACCGTAT GCGCCAGCAG
GGGATGAAAC TGGTTTCTGC CTCTTCTATT TCAGATCCCA TCATTCAATT GATTGCCTCT
TTTGCATTGG CACTTGTACT TTATGCGGCA AGTTTTCCAA GTGTAATGGA AACGTTGACT
GCCGGTACTA TCACCGTTGT ATTCTCTGCG ATGATTGCTC TGATGCGTCC ATTGAAGTCG
CTGACAAATG TTAATACCCA GTTCCAACGC GGTATGGCAG CCTGTCAGAC GTTATTCAGC
ATATTGGATA TGGAGCAGGA GAAAGACGAA GGCAAGCTTG AAGTTGAACG GGCGAAAGGT
GATATAGAAT TCCGCCATGT GACTTTCTAT TATCCCGGTA AGGATACGCC TGCGCTAAAT
GATATCAATA TACACCTTGA AGCGGGCAAG ACCGTGGCAT TGGTTGGGCG CTCAGGTTCA
GGTAAATCCA CCATTGCTAA CTTACTGACC CGTTTCTACG ATGTCAGTGA AGGGAGCATT
TTGTTAGATG GGCATGATCT GAGAGATTAC CGGTTAGGTG CCTTACGTAA TCAAGTGGCG
TTGGTTTCAC AAAATGTTCA CTTATTCAAC GATACTGTCG CTAATAATAT TGCTTACGCC
CGTAATGAAC AGTACAGCCG TGCTGAAATT GAAGAAGCCG CTCGAATGGC GTATGCCATG
GACTTTATCA ATAAGATGGA ACACGGTTTG GATACCGTTA TTGGCGAGAA CGGTATCATG
CTCTCCGGTG GTCAACGTCA GCGTATCGCT ATCGCGCGTG CTTTACTACG GAACTGCCCG
ATATTGATTT TGGATGAAGC GACTTCGGCG CTGGATACAG AATCAGAGCG AGCTATTCAG
GCCGCTTTAG ATGAGTTACA AAAAAACCGA ACTTCTCTGG TGATCGCCCA TCGCTTATCC
ACTATCGAGA AAGCAGATGA GATCGTGGTC ATTGAAGACG GGCGTATTGT GGAGCGTGGT
GTACACGCTG AATTGCTGGT CCAGCAAGGT GTCTATGCGC AGCTCAACCG TATGCAGTTT
GGCCAATGA
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| Protein sequence | MMNDKDLSTW QTFRRLWPTI SPYKAGLIVA AIALILNAAS DTFMLSLLKP LLDDGFGNSN
SSILKWMPLA VIGLMVVRGV TGFVSSYCIS WVSGKVVMHI RRRLFSHMMG MPVSFFDQQS
TGTLLSRITY DSEQVAASSS SALVTVVREG ASIIGLFIMM FYYSWQLSLI LIVIAPIVSI
SIRLVSKRFR NISKNMQNTM GEVTTSAEQM LKGHKEVLIF GGQKVETERF DAVSNRMRQQ
GMKLVSASSI SDPIIQLIAS FALALVLYAA SFPSVMETLT AGTITVVFSA MIALMRPLKS
LTNVNTQFQR GMAACQTLFS ILDMEQEKDE GKLEVERAKG DIEFRHVTFY YPGKDTPALN
DINIHLEAGK TVALVGRSGS GKSTIANLLT RFYDVSEGSI LLDGHDLRDY RLGALRNQVA
LVSQNVHLFN DTVANNIAYA RNEQYSRAEI EEAARMAYAM DFINKMEHGL DTVIGENGIM
LSGGQRQRIA IARALLRNCP ILILDEATSA LDTESERAIQ AALDELQKNR TSLVIAHRLS
TIEKADEIVV IEDGRIVERG VHAELLVQQG VYAQLNRMQF GQ
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