| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_2645 |
|---|
| Symbol | pepN |
|---|
| ID | 6087493 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis YPIII |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010465 |
|---|
| Strand | - |
|---|
| Start bp | 2904388 |
|---|
| End bp | 2907003 |
|---|
| Gene Length | 2616 bp |
|---|
| Protein Length | 871 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 641597714 |
|---|
| Product | aminopeptidase N |
|---|
| Protein accession | YP_001721375 |
|---|
| Protein GI | 170024870 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0308] Aminopeptidase N |
|---|
| TIGRFAM ID | [TIGR02414] aminopeptidase N, Escherichia coli type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.142802 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACACAAC AGCCGCAAGC TAAATACCGT CACGATTATC GTGCGCCGGA TTACACCATC
ACCGATATCG ATCTGGACTT CGCACTGGAT GCGCAAAAAA CGACGGTAAC GGCGGTCAGT
AAAGTAAAAC GTCAAGGAAC AGACGTGACG CCGTTGATTC TAAATGGTGA AGATCTGACA
CTAATCAGTG TCAGCGTTGA TGGGCAAGCA TGGCCACATT ATCGCCAACA GGATAACACG
CTGGTTATTG AGCAATTACC CGCAGATTTT ACACTGACAA TTGTCAATGA TATTCATCCG
GCAACCAACA GCGCGTTGGA AGGGTTATAC CTGTCTGGTG AAGCGCTCTG CACACAGTGT
GAAGCCGAAG GGTTTCGCCA CATTACTTAT TATTTAGACC GTCCTGATGT GCTGGCTCGT
TTTACCACTC GCATCGTGGC GGATAAGTCT CGCTATCCAT ATCTGCTCTC CAACGGTAAC
CGTGTGGGGC AGGGTGAACT GGATGATGGT CGTCATTGGG TCAAGTGGGA AGATCCCTTT
CCGAAGCCTT CTTACCTGTT TGCTTTGGTC GCCGGTGATT TCGATGTGTT ACAGGATAAA
TTTATTACCC GTTCGGGTCG TGAAGTCGCC CTCGAAATTT TTGTTGACCG GGGTAATTTA
GATCGTGCTG ATTGGGCCAT GACATCCCTG AAAAACTCAA TGAAGTGGGA TGAAACTCGC
TTTGGTCTGG AATATGACCT CGACATCTAT ATGATTGTCG CTGTTGATTT TTTCAACATG
GGGGCGATGG AGAATAAAGG GTTAAATGTA TTTAACTCAA AATATGTGCT GGCGAAAGCA
GAAACAGCCA CGGACAAAGA TTATCTAAAT ATTGAAGCTG TTATCGGCCA TGAATATTTC
CATAACTGGA CGGGAAACCG CGTCACTTGC CGCGATTGGT TCCAACTAAG TCTGAAAGAG
GGCTTAACCG TATTCAGAGA TCAGGAGTTC AGCTCCGATT TAGGTTCACG CTCTGTCAAC
CGTATCGAAA ACGTACGGGT AATGCGGGCA GCGCAGTTTG CGGAAGATGC CAGCCCGATG
GCACATGCTA TTCGCCCGGA TAAAGTGATA GAGATGAATA ACTTTTATAC ACTCACCGTG
TATGAAAAAG GTTCAGAAGT TATCCGAATG ATGCATACGC TACTGGGTGA ACAGCAATTC
CAAGCGGGTA TGCGGCTCTA TTTTGAACGT CATGATGGCA GTGCTGCGAC CTGCGATGAT
TTTGTACAGG CAATGGAGGA TGCATCAAAT GTCGATCTGT CTCTCTTCCG GCGTTGGTAC
AGCCAATCAG GGACACCATT ATTGACCGTG CATGACGATT ATGATGTTGA AAAACAGCAG
TATCATTTAT TCGTTAGCCA AAAAACGTTA CCGACAGCGG ATCAGCCAGA GAAATTGCCA
CTGCACATTC CGTTAGACAT CGAACTGTAT GATAGCAAAG GTAATGTCAT CCCATTGCAA
CATAATGGCT TGCCGGTTCA CCACGTGCTG AATGTGACTG AAGCTGAACA GACCTTTACT
TTTGATAATG TGGCACAGAA ACCGATTCCA TCGCTGTTGC GTGAGTTTTC TGCGCCCGTA
AAATTGGATT ACCCTTACAG TGATCAGCAA CTCACGTTCC TGATGCAACA TGCCCGCAAT
GAATTCTCTC GCTGGGATGC TGCGCAAAGC TTGCTGGCAA CTTACATTAA GTTGAATGTT
GCTAAATATC AGCAGCAACA GCCACTGAGT TTACCGGCGC ATGTGGCAGA TGCTTTCCGC
GCAATATTGC TGGATGAACA TCTTGATCCT GCCTTGGCCG CGCAGATTTT GACGTTGCCC
TCAGAAAATG AAATGGCCGA ACTGTTTACG ACTATCGATC CGCAAGCGAT CAGTACGGTA
CATGAAGCGA TCACGCGTTG TCTGGCTCAG GAACTGTCGG ATGAACTGTT GGCCGTATAT
GTCGCTAATA TGACGCCGGT TTACCGTATT GAGCATGTTG ATATTGCCAA ACGTGCTTTA
CGCAATACTT GCCTCAATTA TCTGGCCTTT GGTGATGAGG AATTTGCCAA TAAGCTTGTT
TCTTCACAAT ATCATCAAGC CGATAATATG ACGGATTCAT TGGCCGCATT GGCAGCGGCG
GTTGCCGCTC AGTTACCTTG CCGTGATGAG TTGTTGGCGG CCTTTGATGT GCGCTGGAAT
CATGACGGTT TGGTTATGGA TAAGTGGTTT GCTCTACAAG CGACCAGCCC GGCGGCGGAT
GTCCTGGTAC AGGTACGTAC CTTACTGAAA CACCCTGCAT TCAGTTTGAG TAATCCAAAC
CGTACCCGTT CGTTGATTGG TAGTTTTGCT TCCGGTAACC CGGCTGCATT CCATGCGGCT
GATGGTAGTG GTTATCAGTT CTTGGTTGAG ATACTCAGTG ACTTAAATAC CCGTAACCCA
CAAGTTGCTG CGCGGTTAAT TGAGCCGTTG ATCCGCCTGA AACGTTATGA TGCAGGGCGT
CAGGCGCTGA TGCGTAAGGC CTTGGAGCAA TTGAAAACGC TGGATAATTT ATCGGGTGAT
CTGTACGAGA AGATAACCAA AGCCCTGGCG GCATAA
|
|---|
| Protein sequence | MTQQPQAKYR HDYRAPDYTI TDIDLDFALD AQKTTVTAVS KVKRQGTDVT PLILNGEDLT
LISVSVDGQA WPHYRQQDNT LVIEQLPADF TLTIVNDIHP ATNSALEGLY LSGEALCTQC
EAEGFRHITY YLDRPDVLAR FTTRIVADKS RYPYLLSNGN RVGQGELDDG RHWVKWEDPF
PKPSYLFALV AGDFDVLQDK FITRSGREVA LEIFVDRGNL DRADWAMTSL KNSMKWDETR
FGLEYDLDIY MIVAVDFFNM GAMENKGLNV FNSKYVLAKA ETATDKDYLN IEAVIGHEYF
HNWTGNRVTC RDWFQLSLKE GLTVFRDQEF SSDLGSRSVN RIENVRVMRA AQFAEDASPM
AHAIRPDKVI EMNNFYTLTV YEKGSEVIRM MHTLLGEQQF QAGMRLYFER HDGSAATCDD
FVQAMEDASN VDLSLFRRWY SQSGTPLLTV HDDYDVEKQQ YHLFVSQKTL PTADQPEKLP
LHIPLDIELY DSKGNVIPLQ HNGLPVHHVL NVTEAEQTFT FDNVAQKPIP SLLREFSAPV
KLDYPYSDQQ LTFLMQHARN EFSRWDAAQS LLATYIKLNV AKYQQQQPLS LPAHVADAFR
AILLDEHLDP ALAAQILTLP SENEMAELFT TIDPQAISTV HEAITRCLAQ ELSDELLAVY
VANMTPVYRI EHVDIAKRAL RNTCLNYLAF GDEEFANKLV SSQYHQADNM TDSLAALAAA
VAAQLPCRDE LLAAFDVRWN HDGLVMDKWF ALQATSPAAD VLVQVRTLLK HPAFSLSNPN
RTRSLIGSFA SGNPAAFHAA DGSGYQFLVE ILSDLNTRNP QVAARLIEPL IRLKRYDAGR
QALMRKALEQ LKTLDNLSGD LYEKITKALA A
|
|---|
| |