Gene YPK_2623 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_2623 
Symbol 
ID6088073 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand+ 
Start bp2877671 
End bp2878351 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content44% 
IMG OID641597692 
Producthypothetical protein 
Protein accessionYP_001721353 
Protein GI170024848 
COG category[S] Function unknown 
COG ID[COG3110] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.515334 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACTTG GTCTGGTTGC AGGGATGTTG GCCGTCTGCT TTAGTTTTTC CTCTGTCGCG 
ATGACATTAA AACTCACGCC AGAAATTGAC CTGCTCGTCG TCGATGGCAA AAATATGTCT 
GGCTCCTTAT TGAAAGGTGC GGATAGTTTG GAATTAAACA GTGGTATGCA TCAGATTCTG 
TTTAAAGTGA TAAAGCCGCT ACCTACAGAC CCCTTAGTTC TTTATTCTTC GCCACCATTA 
ATCGTAGTGT TTAATGCTCA TAATACTCGG TCAGTTGCCA TAAAATTACC GGTAATTAAC 
ACCCTACGAG ATGGGCATCA ATTCTCCAAA AATCCTTTAT ATCAACTTAT TGGCGACAAT 
GGGCACCCGT TATCTGTACG TCACGACGTT TTACGCCAAG ACCATCTAAA TAATAGTACG 
ACTCTTGAAA CAGTAATGGC GGCATATAAT GTTGGGAAAT ACAACGCATC CGTCCCCGCG 
TTTGCGGCAA TCCCCCCCTC ACCGGTGAGT GCAGTGCCCG GTACGACAAT TCCGGTTGCT 
GGCGTCAATA CCCCACATAA AACGGCCAGT TTGCAAGGTG AAAATGTCAC CGAACAAATG 
CTGCAATATT GGTTCTTGCA AGCAAATCCA GAAACCCAGA AACGTTTCCT GATATGGGCA 
AAAAAACAAC CTATCCACTA A
 
Protein sequence
MKLGLVAGML AVCFSFSSVA MTLKLTPEID LLVVDGKNMS GSLLKGADSL ELNSGMHQIL 
FKVIKPLPTD PLVLYSSPPL IVVFNAHNTR SVAIKLPVIN TLRDGHQFSK NPLYQLIGDN 
GHPLSVRHDV LRQDHLNNST TLETVMAAYN VGKYNASVPA FAAIPPSPVS AVPGTTIPVA 
GVNTPHKTAS LQGENVTEQM LQYWFLQANP ETQKRFLIWA KKQPIH