| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_2609 |
|---|
| Symbol | |
|---|
| ID | 6088678 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis YPIII |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010465 |
|---|
| Strand | - |
|---|
| Start bp | 2862716 |
|---|
| End bp | 2863453 |
|---|
| Gene Length | 738 bp |
|---|
| Protein Length | 245 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 641597677 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_001721339 |
|---|
| Protein GI | 170024834 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACCTTT TTATTAGCGG TGGTGCCAGT GGCATTGGAC GAAGTGTGGT CATTGCTGCT
TTGAGCAAAG GCTGGAATGT TGGCTTTAGT TATCACAATA ACAAGGAAGG TGCACAACAG
TTGCTTGATA TCGCGGTAGC GGAGTTTCCT CGGCAATTAT GTCGTGCCTA TCAACTCGAC
GTTATTGATA GTGGTGCAGT AGAGTACGTG GGAGACCGTC TTCTCGTCGA TTTTAGTAAC
ATTGATGCGG TTGTTTGCAA TGCTGGCATA GATTTACCGG GCAATTTGGT GTCGATGACC
GATGAAGATT GGGCCTTGGT ACTTAATACT AATTTAACTG GCACCTTCTA TCTTATTCGT
TATTTTTTGC CTCTATTTCT TGCTAATAAA TATGGGCGCA TTGTCACTCT ATCTTCACTC
GCTAAAGATG GGTCATCAGG ACAAGCGGCT TATGCTGCAT CAAAAGCTGG TTTGGTGGGG
TTAACTAAAA CAACAGCGAA GGAATATGGA CATTTCGGTA TTACGGCCAA TGTCGTTGTC
CCAGGCTTAA TTAATACCGA AATTATTGGT GATGACATTA AGGGTATTAA GAATTTTTTT
GCTCAATATG CGCCAGTGGG AAGGCTGGGC TCCCCCAGTG AAGTCGCTGA GGTCATTTTA
TTTCTTGTTG CTAAAGAAAG TAGTTATGTA AACGGTGCGG TTTTCAATGT GACCGGTGGC
ATTGACTGGG TTTATTAA
|
|---|
| Protein sequence | MNLFISGGAS GIGRSVVIAA LSKGWNVGFS YHNNKEGAQQ LLDIAVAEFP RQLCRAYQLD
VIDSGAVEYV GDRLLVDFSN IDAVVCNAGI DLPGNLVSMT DEDWALVLNT NLTGTFYLIR
YFLPLFLANK YGRIVTLSSL AKDGSSGQAA YAASKAGLVG LTKTTAKEYG HFGITANVVV
PGLINTEIIG DDIKGIKNFF AQYAPVGRLG SPSEVAEVIL FLVAKESSYV NGAVFNVTGG
IDWVY
|
|---|
| |