| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_2600 |
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| Symbol | |
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| ID | 6089015 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | - |
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| Start bp | 2855972 |
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| End bp | 2856472 |
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| Gene Length | 501 bp |
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| Protein Length | 166 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641597668 |
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| Product | type VI secretion protein |
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| Protein accession | YP_001721330 |
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| Protein GI | 170024825 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3516] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03358] type VI secretion protein, VC_A0107 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCTCTT CAAGCTTCCA AAATGAGATA CCTAAAGCAC GCATTAACAT CAAATTAGAC
CTGCATACTG GCGGGGCGCA AAAGAAAGTC GAACTGCCTT TGAAGTTGTT GGTGATGGGC
GATTACAGCA ACGGTCAGGA GCAGCGCCCG CTGTCTGAAC GTGAAAAACT CAATATCAAT
AAAAACAATT TTAACAGTGT GCTGGCTGAA TTCCAACCGA GCCTGAAACT CGCTGTACCG
GACACGCTGG CCGGGGATAA CACCGATACA GCCGTCGCTT TGACCTTCCG CGAGATGAAA
GATTTCGAAC CGGAAAGCGT CGCCCGTCAA ATCCCGCAAC TGCGCGCCTT GCTGGCGATG
CGCAACCTGC TGCGAGACCT CAAATCCAAT CTGCTGGACA ACGCCACCTT CCGCCGTGAG
CTGGAAAATA TCCTCAAAGA CGATGCCTTG AGCGATGAAC TGCGCGCTGA ACTGGCGGCC
CTGGCACCAA AAGAGGGTTA A
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| Protein sequence | MSSSSFQNEI PKARINIKLD LHTGGAQKKV ELPLKLLVMG DYSNGQEQRP LSEREKLNIN
KNNFNSVLAE FQPSLKLAVP DTLAGDNTDT AVALTFREMK DFEPESVARQ IPQLRALLAM
RNLLRDLKSN LLDNATFRRE LENILKDDAL SDELRAELAA LAPKEG
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