| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_2590 |
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| Symbol | |
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| ID | 6089233 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | - |
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| Start bp | 2845578 |
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| End bp | 2847179 |
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| Gene Length | 1602 bp |
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| Protein Length | 533 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641597658 |
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| Product | type VI secretion-associated protein |
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| Protein accession | YP_001721320 |
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| Protein GI | 170024815 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3515] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03362] type VI secretion-associated protein, VC_A0119 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGACGT TAACTACCTT GCTCACCGCT TGTGCCGCAG AGCCTGAGCC ACTTTTACAG
CAGGCCAGAC AACAGGTTGC GCTCTGGGAA CGTTGGTTGC AACCGGTGAC ACCCGATAAG
CATACCGGTG AAGACCCCGG TTACGATGAC CACTTCCAAC AGATGCGTGA AGAGGTCAAT
AAGCTCTCGG GTGCCGATAC CACGCTGACC TGCGAGCTGG CTGAAAAGCT GTTCACCACA
CACGGCAAGG ATGTGCGGGT GGCAACCTAT TACGTCTGGG CGCGGTTGCA CCGTGACGGC
GAGGCCGGGC TGGCGGATGG CCTTTCCCTG CTGGCCGGGC TGATCACGCG CTTTGGTGAG
GGCCTGCATC CGCTGCGTGC AACCAGCCGG AAAACCGCGT TGGAGTGGCT GGCCGGCTCC
CGGATGCGCG ACAGCTTGTC ACTTTACCCG GAAGTGGATA AAGCCGATTT TGAGCGTATC
GTGGGCGCAC TGGCCCTTAT CGAACAGGGG CTCAGTCTCT GGGACGAAGG CGTCCGGCCG
CAACTGGGCG GGTTGTATAC CGCCCTGGAA AACCGCCTCG TGCAATCTGG CGGGCTAAAT
GCCGTGGTGC CGCAAAACAG CAGCGGGTCA TCATCGGCAG GCAGCTTGAA CCCGGCCAAC
ATGGCGTCAC CGGCGTTGCG CCCAGTGCAA TCGGGGCGTG ACCTGCTCGA TCAGACCAAA
ACGCTGGCAA AATACCTGCG CAACCAGCCG CAGGGCTGGC TCTCCGGGCA TCATCTTATC
AAAAGCGTGC GCTGGGATAC GGTACATCAG TCACCGCCAT TAGATGTGAA CGGACGGACC
CGGCTGGTAC CGCCGCGCCC GGAATATCGC GTACAGCTCA AGCGGCTTTA TCTGCAACAA
AACTGGCTGG CGTTGCTGGA ACAGGCCGAA TCGATATTTG CCGAAGGGGT TAACCATTTC
TGGCTCGATG TGCAGTGGTA CCTGCATCAG GCCCTCAGCA AAGCGGGGGC CCCATTCGAT
GGCTGGGCGA GCTGTATCAC GCAGGATTTA CGGTTATTAC TGACCCGGCT GCCGGGGCTG
GAAGGGCTAT GCTGGAGTGA CGGCACGCCA TTTGCCGATG AGGTGACGCT GGGGTGGATA
AACCAGCAGG TACTGGAGTC GGTCTCGGGC TGGGGCAGCG AGCCGGCCGC CGTTTCATCC
GGTGAGGATG GCATTCTGTT GCTGGAGCCA GAAGCTTTGG CTCAGGCGGA CAGCGAAGGA
ATTGAAGCGG CGCTTAACTG GTTGCAGTCA CGACCGGGGA TCACCACGGC GCGCCATCAG
TGGCTGCTGC GTCTGGTGAT GGCCCGGGTG GCGGAGCAGT ACGGTAAGAA CGATATGGCA
CTGCATCTGC TGAGTGGCCT TGATAGCAGC GGCGCGTTGT TGACCTTGCC ACAGTGGGAG
CCGGGGTTGG TGTTTGAAGT TAAAGCCCGC CGTTTGAAGC TGTTGCGTAT GAAGGCACAA
CGGGGTGACA GTGATAAAAC CCGCCTGCAT GCTGAAATGG AAAGCCTGCT CGGTGGGCTT
ATCGCCCTCG ACCCGGCCCG TGCGGCCGTA TTATGCGGAT AA
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| Protein sequence | MATLTTLLTA CAAEPEPLLQ QARQQVALWE RWLQPVTPDK HTGEDPGYDD HFQQMREEVN
KLSGADTTLT CELAEKLFTT HGKDVRVATY YVWARLHRDG EAGLADGLSL LAGLITRFGE
GLHPLRATSR KTALEWLAGS RMRDSLSLYP EVDKADFERI VGALALIEQG LSLWDEGVRP
QLGGLYTALE NRLVQSGGLN AVVPQNSSGS SSAGSLNPAN MASPALRPVQ SGRDLLDQTK
TLAKYLRNQP QGWLSGHHLI KSVRWDTVHQ SPPLDVNGRT RLVPPRPEYR VQLKRLYLQQ
NWLALLEQAE SIFAEGVNHF WLDVQWYLHQ ALSKAGAPFD GWASCITQDL RLLLTRLPGL
EGLCWSDGTP FADEVTLGWI NQQVLESVSG WGSEPAAVSS GEDGILLLEP EALAQADSEG
IEAALNWLQS RPGITTARHQ WLLRLVMARV AEQYGKNDMA LHLLSGLDSS GALLTLPQWE
PGLVFEVKAR RLKLLRMKAQ RGDSDKTRLH AEMESLLGGL IALDPARAAV LCG
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