Gene YPK_2576 details

Gene Information

• Locus tag: YPK_2576
• ID: 6089014
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pseudotuberculosis YPIII
• Kingdom: Bacteria
• Replicon accession: NC_010465
• Strand: +
• Start bp: 2829983
• End bp: 2830651
• Gene Length: 669 bp
• Protein Length: 222 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 641597644
• Product: ABC transporter related
• Protein accession: YP_001721306
• Protein GI: 170024801
• COG category: [V] Defense mechanisms
• COG ID: [COG1136] ABC-type antimicrobial peptide transport system, ATPase component

Plasmid Coverage information

• Num covering plasmid clones: 38
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTACATT TACAGAATGC AAAAAAATAT TACACAACAA AAGTCATAAA AACCAGAGTC 
CTAAATAATA TAACGCTTTC TGTAGAGAAA GGAGAGTTTG TTTCTATCAT GGGGCCATCA 
GGATCAGGTA AATCAACACT ACTCAATATT GTCGGCATGT TTGAATCCTT GGATTCCGGA 
TCGCTTACGT TGGCCGGAAA ACATGTTGAT AACCTGGGTT ACTCTCAACG GATCACATTA 
AGGCGCGAAT TAATAGGGTA TATATTTCAA TCATTTAATC TTATCCCACA TTTATCAATA 
TTTGATAATG TCGAGTTGCC GTTGAAATAT CGTGGGGTCG CTAAAAAAGA CCGTATTGAG 
CAAGTAAATC AAATTTTGAG CCTTTTGGGG ATCGATAACC GAAAAAACCA TAAACCCATG 
CAATTATCAG GTGGTCAACA ACAACGTGTG GCCATTGCCA GAGCGATGGT AACTTGCCCC 
GCATTAATAT TGGCTGATGA GCCTACCGGT AATTTAGACA GTAAGAATGC TCGAGCGGTA 
CTTGAGCAAT TAAAAGCAAT AAACCAGTCA GGGACTACCA TCATCATGGT CACACACTCA 
GATGAAGCGT CAAGTTATAG TAATAGAATA CTCAACATGA AAGATGGGAA TATTAACATG 
AAAAAATAG 

 

Protein sequence

MLHLQNAKKY YTTKVIKTRV LNNITLSVEK GEFVSIMGPS GSGKSTLLNI VGMFESLDSG 
SLTLAGKHVD NLGYSQRITL RRELIGYIFQ SFNLIPHLSI FDNVELPLKY RGVAKKDRIE 
QVNQILSLLG IDNRKNHKPM QLSGGQQQRV AIARAMVTCP ALILADEPTG NLDSKNARAV 
LEQLKAINQS GTTIIMVTHS DEASSYSNRI LNMKDGNINM KK