| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_2575 |
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| Symbol | |
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| ID | 6088362 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | + |
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| Start bp | 2828719 |
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| End bp | 2829981 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 641597643 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001721305 |
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| Protein GI | 170024800 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATATAA AATTAGAAAA AAAGATAAAT ATCAACAGTA GAGAGAAAAT AGTTATACTT
TCCGTGTTAC TTATTCTATT TTTAAGCTGC TTTTTTATTT ATTATTTATT CACCAAAGAA
AGCGCCCTGC TCGTTCCTCG AGAAAGAGCC ATATTCTATA CTGCTCAATT TGAGCCATAT
CAAGACGTAT TGGTGACACG CGCCATTACG GTACCCAATG AGAGTGTTAT TTTATCAAGT
GAAAGAGGAG GTAAAATCAT TGAAATAGTC AAGCAATCTG CTGAAAATGT GATAAAAGGC
GATGTGATTG CTCGATTATC TAATTATGAC TTTACACTAG AAGCCACATC CAGAATGGCG
GATATTATGG AGCAAATAAA TAGCCTCCGT AATATGAGAA TGAGATTAGA ACAAGATAGC
AGAGATACTC AACTCAGTTT GCAAGAAGCT CAACACCAGA TAGATATAAT CTCTAAAGAT
TTGAAAAGAT ATAAAGTACT TGACGAAAAA CTCTTGATTG CAAAGTCTGA ACTAGAGCGA
CAGGCCGATA GACTAATAAA TTGGAAGACT AAGAGTAATA TACTACAAAA GCATAATAGT
AGGAACCAAA AATCATTCCC TTCTCAATTT AAAAACATAG ATGAATCGAT TATATTACTT
GAAAAAATGA TGAAAATGAT TGAAGTTGGC ATTGAGCAAC TCGTTATTAT TGCACCTATT
GATGGTACAT TATCTGTTCT TGATATTGAA TTAGGTCAAC AAATAAAATC AGGCGAAAAA
ATATCAGTAA TAGACAATTT AAATTCATAT TATTTCAATG TTTATTTCAG TGAAAATTAT
ATCGATAAGA TAAAACCTAA TACTCAAATT ATCGCACAGA TAAATGGTCA AGATACTCAA
CTACTGATAG AGTCAGTATC AGCAATAGTA GACAATGGAA AATTCAAAGC AAAGCTTAGG
CCAATTGAAT CAGGCATCGC TCATCTTAAA CGAGGGCAAT CTATTGAAAT TCGTATTGCA
CTACAAGAAG AAAATAATCA CGTACTATTA GTCCCAACTG AAAGTGTGTT TTCAAATAGC
AATGGTGACC ATTTTATATA TATTTATCAA GATAAATATG ACCGTGCAAT TAAAACAAAA
GTTGAAGTTA AACGTCGAAA TTCGATTAAA ACAGAGATCA CATCTGGATT ACAGCCAAGT
CAACGCATTG TAAAAATGCC TGATGATAGT GATAAAATAG CAAATATCAT AGAGTTTAAA
TAA
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| Protein sequence | MDIKLEKKIN INSREKIVIL SVLLILFLSC FFIYYLFTKE SALLVPRERA IFYTAQFEPY
QDVLVTRAIT VPNESVILSS ERGGKIIEIV KQSAENVIKG DVIARLSNYD FTLEATSRMA
DIMEQINSLR NMRMRLEQDS RDTQLSLQEA QHQIDIISKD LKRYKVLDEK LLIAKSELER
QADRLINWKT KSNILQKHNS RNQKSFPSQF KNIDESIILL EKMMKMIEVG IEQLVIIAPI
DGTLSVLDIE LGQQIKSGEK ISVIDNLNSY YFNVYFSENY IDKIKPNTQI IAQINGQDTQ
LLIESVSAIV DNGKFKAKLR PIESGIAHLK RGQSIEIRIA LQEENNHVLL VPTESVFSNS
NGDHFIYIYQ DKYDRAIKTK VEVKRRNSIK TEITSGLQPS QRIVKMPDDS DKIANIIEFK
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