Gene YPK_2563 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_2563 
Symbol 
ID6089367 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp2813602 
End bp2814339 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content47% 
IMG OID641597631 
Producthypothetical protein 
Protein accessionYP_001721293 
Protein GI170024788 
COG category[S] Function unknown 
COG ID[COG2949] Uncharacterized membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGGAAAC GCCTGATTAT TAGCTTAATT ATCATCATTG GATTATTGAT GGTGACAGCT 
ATTACGCTCG ATCGCTGGAT CAGTTGGAAA ACTGCGCCTT TTATCTACGA TGAACTCCAA
GAACTGCCTC ACCGGCAGGT CGGTGTAGTA TTAGGTACAG CGAAATATTT TCGTACCGGT
GGCATTAATC AGTTTTATCA ATACCGCATT CAAGGGGCAA TAAATGCCTA TAACAGCGGT
AAGATCAGCT ATTTATTGCT CAGTGGTGAT AATGCCCAGC ACAGCTATAA CGAACCAATG
ACCATGCGCC GCGACCTAAT CGCTGCAGGT GTTGCTCCCG CGGATATCGT GCTGGATTAT
GCAGGTTTTC GGACTCTGGA CTCCATTGTG CGCACTCGCA AAGTCTTTGA TACTAATGAT
TTCATTATTA TCACCCAACG CTTTCACTGT GAGCGGGCAT TATTTATCGC CATGTACATG
GGCATTCAAG CACAATGCTT CGCAGTACCT TCACCAAAAA ATATGCTCAG CGTGCGAGTA
CGGGAGATTT TTGCGCGCCT TGGTGCCCTG TCTGACCTCT ATATTCTTAA GCGGGAACCT
CGCTTTCTTG GTCCATTGAT CCCCATTCCG GCCGTGCATG TGATACCAGA TGACGCACAA
GGTTACCCAG CGGTAACACC CGATCAGTTA GTCGAACTGG AGCGCCGGTT GGCAGAAAAG
AAACAACCAA GCCAATGA
 
Protein sequence
MWKRLIISLI IIIGLLMVTA ITLDRWISWK TAPFIYDELQ ELPHRQVGVV LGTAKYFRTG 
GINQFYQYRI QGAINAYNSG KISYLLLSGD NAQHSYNEPM TMRRDLIAAG VAPADIVLDY
AGFRTLDSIV RTRKVFDTND FIIITQRFHC ERALFIAMYM GIQAQCFAVP SPKNMLSVRV
REIFARLGAL SDLYILKREP RFLGPLIPIP AVHVIPDDAQ GYPAVTPDQL VELERRLAEK
KQPSQ