Gene YPK_2559 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_2559 
Symbol 
ID6089547 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp2808959 
End bp2809366 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content47% 
IMG OID641597627 
Producthypothetical protein 
Protein accessionYP_001721289 
Protein GI170024784 
COG category[R] General function prediction only 
COG ID[COG1380] Putative effector of murein hydrolase LrgA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.22344 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTAATA TGATGTCACT TTGCTGGCAG TACCTGCGAG CTTTCACCAT TATTTACCTG 
TGCTTATGGG CAGGGAAAGC TCTGGCCTTA CTTCTGCCGA TTGTCATCCC CGGCAGTATC
ATCGGCATGT TGATTCTGTT CGTCTTACTC ACCTTGCAGA TTTTACCCTC ACCTTGGGTA
AAACCAAGCT GCCAGTTACT GATCCGCTAT ATGGCGCTAC TGTTTGTGCC GATAGGCGTC
GGAGTCATGC AATATTACGA ACAGCTCACT AAACAGTTCG GTCCGATCGT GGTTTCCTGC
TTTATCAGTA CCTTAATTGT TATGTTAGTG GTGGCCTATA GCTCACATTA TGTCCACCGT
GACCGCAAAG TCATTAGCCC TTCAACACCG ACTGAGGGGG AAAAATGA
 
Protein sequence
MRNMMSLCWQ YLRAFTIIYL CLWAGKALAL LLPIVIPGSI IGMLILFVLL TLQILPSPWV 
KPSCQLLIRY MALLFVPIGV GVMQYYEQLT KQFGPIVVSC FISTLIVMLV VAYSSHYVHR
DRKVISPSTP TEGEK