| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_2554 |
|---|
| Symbol | metG |
|---|
| ID | 6088952 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis YPIII |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010465 |
|---|
| Strand | + |
|---|
| Start bp | 2801333 |
|---|
| End bp | 2803360 |
|---|
| Gene Length | 2028 bp |
|---|
| Protein Length | 675 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 641597622 |
|---|
| Product | methionyl-tRNA synthetase |
|---|
| Protein accession | YP_001721284 |
|---|
| Protein GI | 170024779 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis
[R] General function prediction only |
|---|
| COG ID | [COG0073] EMAP domain
[COG0143] Methionyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00398] methionyl-tRNA synthetase
[TIGR00399] methionyl-tRNA synthetase C-terminal region/beta chain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTCAAG TCGCGAAAAA AATATTGGTG ACGTGCGCGC TACCATACGC TAACGGTTCT
ATTCATCTCG GCCACATGCT CGAGCATATC CAGGCAGACA TCTGGGTCCG TTTCCAGCGA
ATGCGCGGCA ACCAGGTTCA TTTTATCTGT GCAGATGATG CCCACGGGAC TCCTATCATG
CTGAAAGCTC AGCAAATGGG TATTGAACCA GAGCAGATGA TTGCCGAAAT GAGCCAGGAG
CACCAACAGG ATTTCGCCGG TTTTGCTATC AGTTATGATA ACTATCACTC CACCCACAGT
GATGAAAACC GTGAACTGTC GAGCCTGATC TATGGCCGTC TGAAAGCCAA CGGTTATATA
AAGAACCGTA CTATTTCTCA GCTCTATGAT CCTGAGAAAG GCATGTTTCT GCCCGATCGT
TTCGTGAAAG GCACTTGCCC AAAATGCAAA GCCCCGGAAC AGTACGGCGA TAACTGTGAA
GTCTGTGGCG CAACCTACAG CCCAACTGAA CTTATCGACC CCAAATCCGC CGTTTCTGGT
GCGACACCAG TGATGCGTGA ATCTGAACAC TTCTTCTTCG ATTTACCGGC TTTCAGTGAC
ATGTTGCAAG CCTGGACACG CTCAGGTGCG CTGCAAGAAC AAGTCGCAAA CAAAATGCAG
GAATGGTTTG ATTCCGGCCT GCAACAGTGG GATATCACGC GTGATGCCCC TTATTTCGGT
TTCGAAGTAC CGGATGCACC GGGTAAATAT TTTTACGTCT GGTTAGATGC CCCAATCGGT
TACATGGGGG CGTTTAAAAA CCTATGTGAT AAACGTGGTG ACCTGGATTT TGATGAATTC
TGGGGTAAAG ACGCCAAAAC TGACCTCTAT CACTTCATCG GTAAAGATAT TGTTTACTTC
CACAGTCTGT TCTGGCCAGC CATGTTGGAA GGCAGTAACT TCCGCAAGCC GACAAACCTG
TTTGTCCATG GCTATGTCAC GGTAAACGGC GCGAAAATGT CTAAATCTCG CGGTACGTTT
ATTAAGGCGG GGACTTACCT GAAATATCTG GATGCGGATT GCCTGCGTTA CTACTACGCG
GCGAAACTCT CTTCGCGTAT TGATGATATC GATTTAAATC TGGAAGATTT CGTCCAACGC
GTTAACGTCG ATATCGTTAA TAAAGTGGTG AATCTGGCCT CACGTAATGC TGGTTTTATC
AATAAACGCT TTGCAGGCCA GTTAGCTGAC CAATTGGCTG ACCCGGTGTT GTATAAAACA
TTCACCGATG CCGCAACCAG TATTGCTGAT GCTTATAACA ACCGTGAGTC AGGTAAAGCC
ATTCGTGAAA TTATGGCGCT AGCTGATGTG GCTAATCGCT ATGTTGATGA ACAGGCTCCA
TGGGTGGTCG CTAAACAAGA AGGCCGCGAT GCCGATCTAC ACGCTATCTG CTCGATGGGG
ATCAACCTAT TCCGTGTCCT GATGACCTAT CTGAAACCGG TATTACCCTC TCTGACAGAG
CGTACCGAGG CCTTCCTCAA TACCGAGCTA ACTTGGGATA GCATTGAACA ACCTCTGCTG
GGCCACTCTA TCACCGCTTT CAAGGCACTG TTTAATCGTA TTGATTTAGA CAAAGTAAAC
GAAATGGTCG CCTCGTCTAA AGAAGATATG GCACCTGCAA CCAGGGTTAC AGGCCCGTTA
GCCGATGATC CAATTCAGGA AACCATCAGT TTTGATGACT TTGCCAAAGT TGATATGCGA
ATTGCGTTGA TTCAACAAGC CGAATTTGTT GAAGGCTCAG ATAAGTTATT AAAACTAACA
CTTGAACTTG GAGGGGAGAC CCGCCAGATA TTCTCGGGTA TCCGTTCAGC TTACCCTGAC
CCAAAAGCCT TGGAAGGCCG CATGACCGTG ATGGTCGCTA ACCTTGCCCC GAGAAAAATG
CGCTTTGGGG TTTCAGAAGG CATGGTGATA GCCGCAGGCC CCGGAGGTAG CGATATCTTC
CTGCTTAGCC CTGACAGTGG TGCGCAGCCA GGCATGCAAG TGAAGTGA
|
|---|
| Protein sequence | MAQVAKKILV TCALPYANGS IHLGHMLEHI QADIWVRFQR MRGNQVHFIC ADDAHGTPIM
LKAQQMGIEP EQMIAEMSQE HQQDFAGFAI SYDNYHSTHS DENRELSSLI YGRLKANGYI
KNRTISQLYD PEKGMFLPDR FVKGTCPKCK APEQYGDNCE VCGATYSPTE LIDPKSAVSG
ATPVMRESEH FFFDLPAFSD MLQAWTRSGA LQEQVANKMQ EWFDSGLQQW DITRDAPYFG
FEVPDAPGKY FYVWLDAPIG YMGAFKNLCD KRGDLDFDEF WGKDAKTDLY HFIGKDIVYF
HSLFWPAMLE GSNFRKPTNL FVHGYVTVNG AKMSKSRGTF IKAGTYLKYL DADCLRYYYA
AKLSSRIDDI DLNLEDFVQR VNVDIVNKVV NLASRNAGFI NKRFAGQLAD QLADPVLYKT
FTDAATSIAD AYNNRESGKA IREIMALADV ANRYVDEQAP WVVAKQEGRD ADLHAICSMG
INLFRVLMTY LKPVLPSLTE RTEAFLNTEL TWDSIEQPLL GHSITAFKAL FNRIDLDKVN
EMVASSKEDM APATRVTGPL ADDPIQETIS FDDFAKVDMR IALIQQAEFV EGSDKLLKLT
LELGGETRQI FSGIRSAYPD PKALEGRMTV MVANLAPRKM RFGVSEGMVI AAGPGGSDIF
LLSPDSGAQP GMQVK
|
|---|
| |