Gene YPK_2546 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_2546 
Symbol 
ID6087202 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp2790358 
End bp2791656 
Gene Length1299 bp 
Protein Length432 aa 
Translation table11 
GC content43% 
IMG OID641597614 
ProductL-lysine 6-monooxygenase (NADPH) 
Protein accessionYP_001721276 
Protein GI170024771 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3486] Lysine/ornithine N-monooxygenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGACCTT ATGACTTTAT TGGCATCGGT ATTGGCCCGT TTAACCTCGG GCTAGCATGT 
TTAACCCAAC CACTAAATGA TGTTTGCTGT TTGTTTATCG ATCAGAAAGC TGGATTTGAT
TGGCACCCAG GAATGATGCT GGAAAGTGCA ACCTTACAAA CGCCCTTTAT GTCAGATTTG
GTGACGTTAG CATCGCCTAC GCACCCATTA AGTTTTTTAA ATTATATCAA GCAACAGGGG
CGGATTTACT CCTTTTATAT TCGGGAAAAT TTTTTCCTAT TACGTAAGGA ATATAACCAG
TATTGCCAGT GGGCAGTTGA GCAATTACCT AACTTACGGT TTAACACGCA GGTTGATGAC
ATTCATTATG ATGAAGACAC CGCGCTATAT CGGCTGTACT GTTCTGATAC ATGCTCAGGC
AGTCGCCATG AGTTTCTGTG CAAGAAACTG GTTCTGGGTA CCGGCCCCTC GCCACATATA
CCCGAATGTT GCCAACCTTT TATTCAGCAA ATAGTGATGT CCGGCCAGTA CCTGGAACAT
AAAGTGGCGT TACAAAAGAA ACGCGCTATC ACTATTTTGG GCAGTGGGCA AAGTGCGGCC
GAAATTTTCT ATGATTTGTT GTGTGAAATC GATCGCTTTG ATTACCAGTT GAATTGGCTT
ACCCGCTCAC CCCGATTCCT CCCACTGGAA TATACCAAAC TGACGTTGGA AATGACCTCA
CCTGAATATG TGGACTATTT CTATCATCTT CCACCAGAAA AACGTGATGA GCTGAATCTC
ACCCATAAGC CATTGTATAA AGGTATTAAC GGCACATTGA TTAACGATAT CTTCGATCTG
TTGTATACCA AACGTCTGAA CGGTGCTCTC AATGTCAATC TGTACACCAA CAGTGAATTA
CAGCAGGTGA GTTCGAGCCA TGATGGCAAG GGGTTGCACC TGTCAGTGTT GCAGCATGAA
CAGAATCAAT TATTCACATT GGAGACTGAA GGTGCTGTTT TGGCGACCGG GTATCACTAT
CAGCCGCCAA CTTTTATTGA AGGTATACGT CAACATATTC GTTGGGATAA TAAAGGGCGC
TATGAGGTTC AGCGTAATTA CAGCATTGAT CGGAATAATA CGATTTTTGT ACAGAATGTA
GAGCTACATA CCCATGGTTT TGTGACGCCG GATCTCGGTA TGGCTTGTTA CCGCAATTCT
TGTCTGATTC GTGAAATAAC CGGTACTGAA TATTATCCGA TTGAGAAAAA CATTGCTTTT
CAGCAATTCA GTGCGCCATC ACTGAGGAGG AAAGAGTGA
 
Protein sequence
MRPYDFIGIG IGPFNLGLAC LTQPLNDVCC LFIDQKAGFD WHPGMMLESA TLQTPFMSDL 
VTLASPTHPL SFLNYIKQQG RIYSFYIREN FFLLRKEYNQ YCQWAVEQLP NLRFNTQVDD
IHYDEDTALY RLYCSDTCSG SRHEFLCKKL VLGTGPSPHI PECCQPFIQQ IVMSGQYLEH
KVALQKKRAI TILGSGQSAA EIFYDLLCEI DRFDYQLNWL TRSPRFLPLE YTKLTLEMTS
PEYVDYFYHL PPEKRDELNL THKPLYKGIN GTLINDIFDL LYTKRLNGAL NVNLYTNSEL
QQVSSSHDGK GLHLSVLQHE QNQLFTLETE GAVLATGYHY QPPTFIEGIR QHIRWDNKGR
YEVQRNYSID RNNTIFVQNV ELHTHGFVTP DLGMACYRNS CLIREITGTE YYPIEKNIAF
QQFSAPSLRR KE