Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_2544 |
Symbol | |
ID | 6088620 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 2787939 |
End bp | 2789783 |
Gene Length | 1845 bp |
Protein Length | 614 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641597612 |
Product | IucA/IucC family protein |
Protein accession | YP_001721274 |
Protein GI | 170024769 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG4264] Siderophore synthetase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGATGG ACTTATCAGC GCCTCTCTCC CCGCACCAGA GTTTGGAACT CCCCCATTTG CAGCCGGTAC TGTGGCAAAA AGTGAATCGC TTGCACTTGT GTAAAGCTAT TTCTGAGTTT TCCCACGAGT GCTTGTTGGC TCCCCAACGG ATGACAGATC ACCCTGATAG TGAGGGATAT GATTACTATC AGTTGGTGGC GGCGGCGGCG GACAAGCCGG CGAACTATGT TTTTCGTGCT CGTCGCTTGG CACTGGATCA CTGGTTGATT GACCCAGATT CGTTGCATAA AACCGTTAAT GAAAAGAGCA CAGATTTAGA TTTACTGTTA TTTATCATTG AGTTCAAGCG GCAATTGGGC ATCAGTGAGC GAGTATTGCC GACCTATTTG GAGGAAATTA CCAGCACGTT GTACAGCAGC GCATTTAAAC ACTGCCGCAC AGGGATAAGT GCTACCGCCT TGGTGAATGC CAGCTTTCAG ATAATAGAAA AGGAAATGAT GGAGGGGCAT CCTTCCTTTG TCGCTAATAA TGGGCGCATT GGTTTTGATG CTCAGGACTT TCAGAGATTT AGCCCGGAAG CCGCATCAGA TGTGCATCTG GTCTGGCTCG CCGCCCATAA AAGTAAGGCG CATTTTGCCT GCATTGAACA ACTCGATTAC GCGAAGTTGA TGGAACAGGA ACTCGGGGCG GAGGTTCTGG CCGAATTTGA ACAGCAATTA ATAGCCAGAG ACTGTAATCC TCAGGATTAT GTGCTGATGC CGGTGCATCC GTGGCAGTGG CAGAATAAAC TGACTTCGAT ATTCGCGGCT GATATTGCTA ATCAAAGGTT GGTATTTTTG GGGCAGGGCA AAGATGTTTA TCAGGCACAG CAATCTATTC GTACTTTCTT TAATCGCAGC CACCCGCAGC GATATTACGT AAAAATGGCG TTATCGATCC TGAATATGGG GTTTATGCGC GGTTTATCAC CCTACTATAT GGCAACGACA CCAGGAATTA ACGAATGGCT GTTTGACTTG GTTGAAGGCG ATGAAATATT GCAAGCGTAT GGTTTCAAGA TTTTGCGTGA AGTGGCCAGT ATTGGTTTTC GCAATAGCTA TTATGAGCAG GCGATCACCG GGGATTCAGC ATATAAAAAG ATGGCCGCTG CACTGTGGCG GGAGAATCCG CTGCAATTAA TTCAACCCGG TCAGCAACTG ATGACGATGG CCGCCTTGTT ACATTTGGAT CAAGAAGGGA AAGCGCTACT GCCTGCGTTG ATTGATGCAT CCGGGTTATC CACTCAGCAA TGGCTGGAAC GTTATTTGCG TAGCTATTTG TCACCGCTAT TACATTGTTT ATATGTTTAC GATTTGATGT TTATGCCCCA CGGTGAAAAT ATCATTTTGG TTCTACAGAA TGCCGTGCCG CAACATATTT TCATGAAAGA TCTGGCGGAA GAAATTTTGG TGCTGAACAC TGAGGCTGAT TTGCCGGAGA AAGCCCGGCG CATCATCGTG GATATGCCCG ATGAGATGAA AACCCTGACG ATCCTCAGTG ATGTGTTCGA CGGTGTATTC CGCTATTTAG CCGCAGTCTT GGATCAACAA GGGGATTATC CTGAGCGCTA TTTCTGGGCG GATGTTGCGG CCTGTATCCG CCAGTACCAG CAGCAGTATC CTGAATTAGC CGCTAAATTT GCGAGCTATC CGTTGTTTAC ACCCAAAATT AAACGCTGTT GTTTGAACCG CTTACAGCTC AACAATAACC AGCACATGCT GGATTTAGCT GACCCTGTGC AAAGTTTTCA GTTTGCTGAT GATTTGATCA ATCCGTTGGT AGAGTTCGAG GTATCAGCGG GTTAG
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Protein sequence | MMMDLSAPLS PHQSLELPHL QPVLWQKVNR LHLCKAISEF SHECLLAPQR MTDHPDSEGY DYYQLVAAAA DKPANYVFRA RRLALDHWLI DPDSLHKTVN EKSTDLDLLL FIIEFKRQLG ISERVLPTYL EEITSTLYSS AFKHCRTGIS ATALVNASFQ IIEKEMMEGH PSFVANNGRI GFDAQDFQRF SPEAASDVHL VWLAAHKSKA HFACIEQLDY AKLMEQELGA EVLAEFEQQL IARDCNPQDY VLMPVHPWQW QNKLTSIFAA DIANQRLVFL GQGKDVYQAQ QSIRTFFNRS HPQRYYVKMA LSILNMGFMR GLSPYYMATT PGINEWLFDL VEGDEILQAY GFKILREVAS IGFRNSYYEQ AITGDSAYKK MAAALWRENP LQLIQPGQQL MTMAALLHLD QEGKALLPAL IDASGLSTQQ WLERYLRSYL SPLLHCLYVY DLMFMPHGEN IILVLQNAVP QHIFMKDLAE EILVLNTEAD LPEKARRIIV DMPDEMKTLT ILSDVFDGVF RYLAAVLDQQ GDYPERYFWA DVAACIRQYQ QQYPELAAKF ASYPLFTPKI KRCCLNRLQL NNNQHMLDLA DPVQSFQFAD DLINPLVEFE VSAG
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