| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_2530 |
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| Symbol | |
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| ID | 6087249 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | + |
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| Start bp | 2771807 |
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| End bp | 2772544 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641597598 |
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| Product | 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase |
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| Protein accession | YP_001721260 |
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| Protein GI | 170024755 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0106] Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase |
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| TIGRFAM ID | [TIGR00007] phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.701883 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTATTC CCGCTTTGGA TTTGATCGAA GGCAAGGTGG TGCGTTTGCA TCAGGGCGAT
TACGGCCAGC AACGTGATTA CGGCAATCAC CCGCTGCCGC GTTTACAAGA TTATCAGCAG
CAAGGTGCTC AGGTTTTACA CTTGGTGGAC CTGACCGGAG CCAAAGATCC GGCCGCTCGC
CAGATCCCAC TACTGCGCGA GTTACTGGCC GGTGTTGATG TGCCGGTGCA AGTCGGCGGC
GGTATCCGTA ATGAACAAGA TGTCGTGGCT TTACTGGAAG CAGGGGCTGC ACGGGTGGTG
GTGGGTTCAA CCGCCGTTAA GCAACCCGAA ATGGTGCAGC AGTGGTTTGA GCGTTACGGT
GCCGAGGCCA TCGTGCTGGC ATTGGACGTT CGCATTAATG AGGCTGGCTG CAAACACGTC
GCCATCAGTG GCTGGCAGGA AAATTCCGAT GCAACGTTAG AGCAAATCGT CGAGCAATAC
CTGCCTTACG GCCTGAAGCA CGTCCTCTGT ACCGATATTT CGCGTGATGG CACGCTGAGC
GGCTCGAATG TTGAACTGTA TCAGGAAGTG TGCCAGCGCT ATCCACAAGT CGCGTTTCAG
GCATCTGGCG GTATCGGCTG TCTGGATGAT ATCGCCCGCT TACGCGGCAG CGGTGTACAG
GGCGTGATTG TTGGCCGTGC GTTACTGGAC GGCAAGTTTA ACGTGAAGGA GGCTATCGCA
TGCTGGCAAA ACGTATAA
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| Protein sequence | MIIPALDLIE GKVVRLHQGD YGQQRDYGNH PLPRLQDYQQ QGAQVLHLVD LTGAKDPAAR
QIPLLRELLA GVDVPVQVGG GIRNEQDVVA LLEAGAARVV VGSTAVKQPE MVQQWFERYG
AEAIVLALDV RINEAGCKHV AISGWQENSD ATLEQIVEQY LPYGLKHVLC TDISRDGTLS
GSNVELYQEV CQRYPQVAFQ ASGGIGCLDD IARLRGSGVQ GVIVGRALLD GKFNVKEAIA
CWQNV
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