Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_2502 |
Symbol | |
ID | 6089178 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 2736084 |
End bp | 2736965 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641597570 |
Product | polysaccharide deacetylase |
Protein accession | YP_001721232 |
Protein GI | 170024727 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTAAAG AAATATTCTG TGCGTTTGGC GTTGATGTTG ACGCGGTGGC CGGTTGGTTA GGATCTTATG GCGGTGAGGA CTCACCCGAT GATATTTCAC GCGGTATGTT CTCCGGTGAA GTGGGTACGC CACGGTTGCT CAAACTCTTT GCTGACCATA ACCTGCGGGC CACCTGGTTT ATTCCGGGTC ACTCAATCGA AACATTCCCT GAACAAATGA AAGCGGTAGC CGCGGCTGGA CACGAAGTGG GTATCCATGG TTACAGCCAT GAAAACCCTA TCGCCATGAC ACCAGCACAA GAAGAGGCCG TACTGGATCA CTGTATCGCC CTCCTCACTC AATTGACCGG AAAACCGCCC ACGGGCTATG TCGCACCTTG GTGGGAATTT AGCAACGTCA CCAACGAGCT GTTGCTGAAA AAAGGCATTA AATATGACCA CAGCCTGATG CACCACGATT TTCACCCCTA CTATGTGCGC GTCGGCGACC ATTGGACCCG CATCGATTAC AGCAAGTCCC CAGACCACTG GATGAAACCA TTGCAACGAG GGGCCGAAAC CGCACTGGTG GAGATCCCGG CTAACTGGTA CCTGGATGAT TTACCCCCCA TGATGTTTAT CAAGAAAGCG CCCAATAGCC ATGGTTTTGT TAATCCCCGC CATCTGGAAG AGATGTGGCG CGATCAGTTC GACTGGGTAT ACCGAGAACA TGATTATGCC GTATTTACCA TGACCATCCA TCCTGACGTA TCCGGTCGCC CGCAAGTGTT ATTAATGCTG GAACGGTTGC TCAAACATAT CCAGAGCCAT CAGGGTGTAC GTTTCGTGAC CTTTGATGAG ATTGCTGACG ACTACTTGCG CCGTATGCCG CGCAAAATTT GA
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Protein sequence | MAKEIFCAFG VDVDAVAGWL GSYGGEDSPD DISRGMFSGE VGTPRLLKLF ADHNLRATWF IPGHSIETFP EQMKAVAAAG HEVGIHGYSH ENPIAMTPAQ EEAVLDHCIA LLTQLTGKPP TGYVAPWWEF SNVTNELLLK KGIKYDHSLM HHDFHPYYVR VGDHWTRIDY SKSPDHWMKP LQRGAETALV EIPANWYLDD LPPMMFIKKA PNSHGFVNPR HLEEMWRDQF DWVYREHDYA VFTMTIHPDV SGRPQVLLML ERLLKHIQSH QGVRFVTFDE IADDYLRRMP RKI
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