Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_2465 |
Symbol | |
ID | 6087372 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 2698997 |
End bp | 2699794 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641597531 |
Product | PTS system mannose/fructose/sorbose family IIC subunit |
Protein accession | YP_001721195 |
Protein GI | 170024690 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3715] Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC |
TIGRFAM ID | [TIGR00822] PTS system, mannose/fructose/sorbose family, IIC component |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.22287 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGATAA CAACTCTTCA GATTGTGCTG ATATTTATCG TTGCATGTAT CGCCGGGATG GGTTCCATTC TGGATGAGTT CCAATTTCAC CGCCCGCTCG TCGCCTGTAC CTTGGTAGGT ATGGTTCTGG GTGATATGAA AACCGGTATT ATCATCGGTG GTACCTTAGA AATGATCGCG CTTGGTTGGA TGAACATCGG GGCTGCTGTA GCACCTGATG CGGCTCTGGC CTCAATTATT TCAACCATCC TGGTTATCGC CGGGGGCCAA GATATCGGTG CCGGTATCGC CTTGGCGATC CCACTGGCTG CAGCCGGTCA GGTGTTAACT ATTATCGTGC GTACCATTAC CGTGGCCTTC CAACACGCCG CTGATGGCGC TGCCGAACGT GGCAGTCTAC GAGCGATTAC CTGGCTCCAC ATCTCTGCCC TGTTCTTACA GGCAATGCGT ATCGCCATTC CCGCGCTTAT CGTTGCTCTG TCCGTGGGTA CATCTGAAGT TCAGATGATG CTCAGTTCAA TTCCTGAAGT GGTTACCAGT GGCCTGAACA TCGCCGGTGG TATGATCGTT GTCGTTGGTT ACGCCATGGT TATCAACATG ATGCGTGCTG GCTACCTGAT GCCATTCTTC TATTTAGGTT TCGTTACTGC CGCATTTACC AACTTCAACC TGGTTGCATT GGGGGTTATT GGTGTGGTTA TGGCTGTTCT TTATATCCAA GTCAGCCCTA AATACAACAA GTCTCAGGTT GTACAGTCTG GCCCGGCCAA TAACGATCTT GATAACGAAT TAGACTAG
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Protein sequence | MEITTLQIVL IFIVACIAGM GSILDEFQFH RPLVACTLVG MVLGDMKTGI IIGGTLEMIA LGWMNIGAAV APDAALASII STILVIAGGQ DIGAGIALAI PLAAAGQVLT IIVRTITVAF QHAADGAAER GSLRAITWLH ISALFLQAMR IAIPALIVAL SVGTSEVQMM LSSIPEVVTS GLNIAGGMIV VVGYAMVINM MRAGYLMPFF YLGFVTAAFT NFNLVALGVI GVVMAVLYIQ VSPKYNKSQV VQSGPANNDL DNELD
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