| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_2454 |
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| Symbol | |
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| ID | 6087325 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | - |
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| Start bp | 2687475 |
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| End bp | 2688842 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641597520 |
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| Product | 4-hydroxyphenylacetate transporter |
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| Protein accession | YP_001721184 |
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| Protein GI | 170024679 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2271] Sugar phosphate permease |
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| TIGRFAM ID | [TIGR02332] 4-hydroxyphenylacetate permease |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.564928 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGATT CACTGTCTAC CGCACCGGGC GTTACCCCGC CGGTCAATAA AAACACACCA
TTAAGTGCGC AGCAGCAGTC CGTCATTAAT AAACTGTTTC GCCGTCTGAT CCCGTTCTTA
TTCTTGTTGT TTGTTTTTGC CTTCCTTGAT CGTATCAATA TAGGTTTTGC GGGTTTGACG
ATGGGGAAGG ATTTAGGGCT AAGTGCCACA ACCTTTGGTT TAGCGACTAC ATTATTCTAC
GTGACATATA TCTTATTCGC GATCCCCAGC AATATCATGT TGGGGATCGT GGGTGCCAGG
CGTTGGATTG CGACCATTAT GGTGCTCTGG GGGATCGCTT CTACCGCGAC CTTATTTGCC
GTCGGCCCCA ACAGTTTGTA TCTCTTACGA ATGATTGTTG GGATCACCGA AGCCGGTTTT
TTACCCGGCA TTCTGGTGTA TTTAACTTAT TGGTTTCCGG CCCACTTTCG AGCCAGAGCC
AATGCGCTGT TTATGGTGGC GATGCCAGTG ACTATGGCGC TCGGCTCTCT GGTTTCCGGC
TATATTTTGG CGCTTGATGG TTTTTTGAAT ATGCGTGGTT GGCAGTGGCT ATTTCTGCTG
GAAGGCTTTC CATCGGTCTT GCTGGGGGGG GTGGTCTGGT TCTATCTGGA CGATACCCCG
CAGAAAGCGC GCTGGTTAAC GAAAGAAGAT AAACAGTGTC TGCAAGAGAT GCTGGAGAGT
GACCGTTTGC AATTGGCGAA ACAGGCGGAT TATGGTGCCT TACCACAATC AGCGATGTGG
CGGGAAATTT TCACCCCCGT GGTGCTGATG TATACACTGG CTTACTTCTG TTTAACCAAT
ACCCTAAGTG CGGTGAATAT TTGGACGCCG CAGATCCTGC AAAGTTTTAA TCAGAGCAGC
AGCAATATCA CTATCGGTCT GCTGGCCGCT ATCCCACAAG TTTGTACCAT TGCCGGCATG
ATCTGGTGGA GTAGACGCTC GGATCGGGTT CAGGAACGCA AAATGCACAC GGTTTTGCCG
TATCTGTTTG CCGCAGCGGG GTGGGGGCTG GCATCGGCCA CACAAAATAG CGTAATCCAG
TTGTTAGGGA TCATTATGGC CTCGACCGGG TCATTTACGG CGATGGCGAT TTTCTGGACT
ACACCGGATC AATCCATCAG CCTGAGAGCC AGAGCTGTTG GTATTGCAGT GATAAATGCC
ACTGGAAATA TTGGTTCGGC TGTCAGCCCG GTTTTAATTG GTTGGTTGAA AGACCAGACC
GGTAACTTTA ATTCCGGGCT GTATTTCGTT GCCGGTTTAT TGGTTATCGG GGCTGTTATT
TTCTTGATGA TTCCAATGAA AAAGGCACCT CCAAAAGCCA TTTTCTAA
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| Protein sequence | MSDSLSTAPG VTPPVNKNTP LSAQQQSVIN KLFRRLIPFL FLLFVFAFLD RINIGFAGLT
MGKDLGLSAT TFGLATTLFY VTYILFAIPS NIMLGIVGAR RWIATIMVLW GIASTATLFA
VGPNSLYLLR MIVGITEAGF LPGILVYLTY WFPAHFRARA NALFMVAMPV TMALGSLVSG
YILALDGFLN MRGWQWLFLL EGFPSVLLGG VVWFYLDDTP QKARWLTKED KQCLQEMLES
DRLQLAKQAD YGALPQSAMW REIFTPVVLM YTLAYFCLTN TLSAVNIWTP QILQSFNQSS
SNITIGLLAA IPQVCTIAGM IWWSRRSDRV QERKMHTVLP YLFAAAGWGL ASATQNSVIQ
LLGIIMASTG SFTAMAIFWT TPDQSISLRA RAVGIAVINA TGNIGSAVSP VLIGWLKDQT
GNFNSGLYFV AGLLVIGAVI FLMIPMKKAP PKAIF
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