Gene YPK_2427 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_2427 
Symbol 
ID6087972 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp2658951 
End bp2659253 
Gene Length303 bp 
Protein Length100 aa 
Translation table11 
GC content48% 
IMG OID641597493 
Productanti-sigma28 factor FlgM 
Protein accessionYP_001721157 
Protein GI170024652 
COG category[K] Transcription
[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2747] Negative regulator of flagellin synthesis (anti-sigma28 factor) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.111558 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAGTA TTGATCGCAC TCAACCGCTA TCGCCAGTAA CACAAGTTCA AGCACGGGAA 
AGCCATGACG TAGCACAACA AACGCGTCAG TCAGCTACCC AGACAAAAAC CCCGGTCAGT
GGTACTGAGG TTAAATTGAG TGATGCGCAG GCAAAATTGA TGCAACCGGG CAGTCAGGAC
ATCAATGTGG AGCGTGTCGA AACATTAAAA CAGGCTATCC GCAGCGGTCA ATTGACTATG
GATACCGGTA AAATAGCCGA TGCCCTGTTA AAAAACGTGG CGGATGAGCT TAAGAATCAT
TAA
 
Protein sequence
MSSIDRTQPL SPVTQVQARE SHDVAQQTRQ SATQTKTPVS GTEVKLSDAQ AKLMQPGSQD 
INVERVETLK QAIRSGQLTM DTGKIADALL KNVADELKNH