| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_2407 |
|---|
| Symbol | |
|---|
| ID | 6087732 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis YPIII |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010465 |
|---|
| Strand | - |
|---|
| Start bp | 2638001 |
|---|
| End bp | 2638960 |
|---|
| Gene Length | 960 bp |
|---|
| Protein Length | 319 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 641597473 |
|---|
| Product | ribokinase-like domain-containing protein |
|---|
| Protein accession | YP_001721137 |
|---|
| Protein GI | 170024632 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0524] Sugar kinases, ribokinase family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCAAAAA TTGTCAGCCT GGGGATTCAT GTTCTTGATG TATTAGGACG TCACGTGAAC
CGATTCCCCC CCGGTGGAGA GCTCGATATT ATTAATGAAA TCCGCTTAAC CGTTGCGGGT
ACAGCGGCTG GGATGAGTGT TGATCTGGCT AAGCTCGGCG GCGATGTTTA TGCGATGGGG
GCCGTGGGTC TGGATGAATC GGGCAACTTT ATTATCGACA CCTTGCGGCG CTATGGGGTT
AATACCGACC ACATTGTACG TAAATCAGAG GTACAAACCT CTTGCAGTAT GCTGCCCATC
AGACCCAATG GCGAGCGGCC GGTTCTGCAT GTTTTGGGGG CCAACGCGAC CTATAGGCTT
GAAGATATCC ATTGGGATGT GATTGCCAGT GCGGATATTC TCCACTTCGG TGGCACTTAT
TTACTGCCCG GCCTTGATGG GCCACCCACG GCCACTATCT TAAAATTTGC CAAAGAGCAT
GGGGTGACTA CCACGCTGGA TTTACTGGTT AACGCCCAAC CTGACCTGCT GGCCAAACTG
GAGCCCGCGT TGCCTTATAT CGATTATTTT ATGCCCGGCT TAGATGAGGC GCGGGCCATT
TGCGGTTTAG AGAAACGTGC TGATGTCATT GCGTTTTTCC TGAACCGCGG GGTGGGCCAC
ACCGTTTTCA AAATGGGGGC TGAGGGGAGC AGTATTGCGT CACTGGACAT GGCGGAGGTT
CTGATCCCCG CGTATAAAGC GCAGGTTGTG GATTCAACCG GCTGCGGTGA TTCCTATTGT
GCGGCCTTTA TTATGGGGTT AACCAAAGGC TGGGATCTGG CGACATCGGG GCGCTTCGCT
TCTGCTGCGG CCTCGCTGGT GGTCTCTGGT TTAGGCTCTG ATGCGGGGAT TATTGATTTT
GAGCATACCC TTAAGGTGAT GAATACGGCC GAAACCTTAC CCATTGCCCA AGAGACTTAA
|
|---|
| Protein sequence | MSKIVSLGIH VLDVLGRHVN RFPPGGELDI INEIRLTVAG TAAGMSVDLA KLGGDVYAMG
AVGLDESGNF IIDTLRRYGV NTDHIVRKSE VQTSCSMLPI RPNGERPVLH VLGANATYRL
EDIHWDVIAS ADILHFGGTY LLPGLDGPPT ATILKFAKEH GVTTTLDLLV NAQPDLLAKL
EPALPYIDYF MPGLDEARAI CGLEKRADVI AFFLNRGVGH TVFKMGAEGS SIASLDMAEV
LIPAYKAQVV DSTGCGDSYC AAFIMGLTKG WDLATSGRFA SAAASLVVSG LGSDAGIIDF
EHTLKVMNTA ETLPIAQET
|
|---|
| |