Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_2400 |
Symbol | fliN |
ID | 6087534 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 2633930 |
End bp | 2634346 |
Gene Length | 417 bp |
Protein Length | 138 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641597466 |
Product | flagellar motor switch protein FliN |
Protein accession | YP_001721130 |
Protein GI | 170024625 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1886] Flagellar motor switch/type III secretory pathway protein |
TIGRFAM ID | [TIGR02480] flagellar motor switch protein FliN |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGACC CTAAGTTTCC GTCTGCTGAT GGAAAGGAAT CCGTGGACGA TCTGTGGGCT GATGCGTTTA ATGAGCAGCA AGCAACAGAA AAACCCACGG CCACAACCGA AGGCGTCTTT AAATCGCTGG AAGCACCTGA GGGGCTGGGT AATTTGCAGG ATATCGATTT AATTCTGGAT ATTCCGGTAA AACTCTCCGT TGAATTAGGT CGCACCAAAA TGACCATCAA AGAGTTACTG CGCCTGTCAC AAGGCTCGGT GGTCTCCCTT GATGGTTTGG CAGGCGAACC CCTGGATATT TTGATTAACG GTTATCTGAT TGCTCAGGGC GAAGTGGTGG TAGTGGCCGA TAAATACGGG GTCCGCATCA CGGACATCAT TACGCCATCT GAACGTATGC GCCGTTTGAG CCGCTAA
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Protein sequence | MSDPKFPSAD GKESVDDLWA DAFNEQQATE KPTATTEGVF KSLEAPEGLG NLQDIDLILD IPVKLSVELG RTKMTIKELL RLSQGSVVSL DGLAGEPLDI LINGYLIAQG EVVVVADKYG VRITDIITPS ERMRRLSR
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