| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_2399 |
|---|
| Symbol | fliM |
|---|
| ID | 6088784 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis YPIII |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010465 |
|---|
| Strand | + |
|---|
| Start bp | 2632932 |
|---|
| End bp | 2633933 |
|---|
| Gene Length | 1002 bp |
|---|
| Protein Length | 333 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 641597465 |
|---|
| Product | flagellar motor switch protein FliM |
|---|
| Protein accession | YP_001721129 |
|---|
| Protein GI | 170024624 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG1868] Flagellar motor switch protein |
|---|
| TIGRFAM ID | [TIGR01397] flagellar motor switch protein FliM |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.569338 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGCGATA GCATTCTTTC ACAAGCAGAG ATTGACGCAC TGTTAAATGG CGATAGCGGG
AGTGAAGAAC CCGAGATAAT CACCGCCAAT GAGACAGACG TCAAACCTTA CGATCCGACG
ACCCAGCGAC GTGTGGTGCG TGAACGCCTA CACGCGTTGG AGATCATCAA CGAGCGTTTT
GCCCGCCAGT TCCGTATGGG GTTGTTTAAC CTATTGCGCC GTAGCCCAGA CATCACGGTC
GGCCCGATAA AAATTCAGCC TTATCACGAC TTTGCCCGCA ATCTGCCAGT GCCAACCAAC
CTTAATCTGG TGCATCTAAA ACCGCTACGC GGTACTGCGC TATTCGTGTT TGCCCCCAGT
TTGGTGTTTA TTGCGGTCGA TAACCTGTTT GGCGGGGATG GCCGTTTTCC AACGAAAGTG
GAAGGCCGTG AATTTACCCA TACCGAGCAA CGGGTTATCA CCCGAATGTT GCGGTTGGCG
TTGGATGCTT ACCGTGATGC CTGGGCGGCC ATCTATAAAA TCGATGTGGA ATATGTTCGC
TCAGAAATAC AGGTGAAATT TACCAATATC ACCACCTCCC CCAATGACAT CGTGGTGAGC
ACGCCTTTTC AGGTGGAGAT AGGCACCCTG AGCGGTGAGT TTAATATCTG TATTCCCTTC
GCCATGATCG AGCCCTTGCG CGAACTGTTG ACCAATCCAC CGCTGGAGAA CTCCCGTCAG
GAAGATAACT ACTGGCGCGA AACCTTAGTG AAGCAAGTTC AGCATTCGGA GCTGGAATTG
GTGGCTAATT TTGTTGATAT CCCTCTGCGA TTGTCACAGA TCCTAAAACT ACAGCCGGGG
GATGTGTTAC CGATAGAGAA ACCGGACCGA CTGATTGGTC ACGTCGATGG CGTACCGGTA
CTAACCAGTC AATACGGGAC ATTAAACGGG CAATATGCCC TGCGTGTTGA ACATTTGATT
AACCCTATTT TGAATGCTCT GAGTGAGGAA CAGCCCAAAT GA
|
|---|
| Protein sequence | MGDSILSQAE IDALLNGDSG SEEPEIITAN ETDVKPYDPT TQRRVVRERL HALEIINERF
ARQFRMGLFN LLRRSPDITV GPIKIQPYHD FARNLPVPTN LNLVHLKPLR GTALFVFAPS
LVFIAVDNLF GGDGRFPTKV EGREFTHTEQ RVITRMLRLA LDAYRDAWAA IYKIDVEYVR
SEIQVKFTNI TTSPNDIVVS TPFQVEIGTL SGEFNICIPF AMIEPLRELL TNPPLENSRQ
EDNYWRETLV KQVQHSELEL VANFVDIPLR LSQILKLQPG DVLPIEKPDR LIGHVDGVPV
LTSQYGTLNG QYALRVEHLI NPILNALSEE QPK
|
|---|
| |