| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_2393 |
|---|
| Symbol | fliH |
|---|
| ID | 6089027 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis YPIII |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010465 |
|---|
| Strand | + |
|---|
| Start bp | 2628184 |
|---|
| End bp | 2628900 |
|---|
| Gene Length | 717 bp |
|---|
| Protein Length | 238 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 641597459 |
|---|
| Product | flagellar assembly protein H |
|---|
| Protein accession | YP_001721123 |
|---|
| Protein GI | 170024618 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1317] Flagellar biosynthesis/type III secretory pathway protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.0211939 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGATC GGATTAACGC CCTGCCCTGG CAACCTTGGT CCCTGAAAGA TTTTGCCAGC
CAATCCGAGG TACCACTGTC CGAGTCTATG CCGGATATCA GTCTGTTATT TCCTAATGAA
CCGATGGAAG CCACAGCCGC CGTTGATGAG CAACAGGTGT TGGTAAACCT GCAATTGGAA
GCCGAGAAGC AGGGCCGCCA GCAGGGGTTT GCCAAAGGCT TGCAAGAAGG GTTGGATAAG
GGTTACCAAA CCGGGCTGGA AGAAGGCCAC CAGCAAGCGC TGGCCGATGC GCAGCAGCAA
TTGGCACCAA TGACCGCCCA CTGGCAAGTT ATGGTGACCG ATTTTCAAAA TACGCTCGAT
ACCTTGGATA GCGTCATCGC CTCACGCCTA GTACAAATAG CGCTGGCCGC GGCGAAACAA
ATTATCGGAC AACCCGCGAT TTGTGATGGT ACGGCCCTCT TGGCGCAAAT CCAGCAGATG
ATCCAGCAAG AACCGATGTT TGCGGGCAAA ACGCAATTAC GGGTAAATCC AGATGATTTA
GCCATTGTTG AACAGCGGTT AGGTTCCACG CTGAGCTTGC ACGGCTGGCG CTTATTGGGC
GACAGCCAGA TTCATGCTGG CGGCTGTAAA GTCAGCGCGG AAGAAGGCGA TTTGGATGCC
AGTCTGGCGA CCCGTTGGCA TGAACTGTGC CGTCTGGCCG CGCCGGGGGA ACTGTGA
|
|---|
| Protein sequence | MSDRINALPW QPWSLKDFAS QSEVPLSESM PDISLLFPNE PMEATAAVDE QQVLVNLQLE
AEKQGRQQGF AKGLQEGLDK GYQTGLEEGH QQALADAQQQ LAPMTAHWQV MVTDFQNTLD
TLDSVIASRL VQIALAAAKQ IIGQPAICDG TALLAQIQQM IQQEPMFAGK TQLRVNPDDL
AIVEQRLGST LSLHGWRLLG DSQIHAGGCK VSAEEGDLDA SLATRWHELC RLAAPGEL
|
|---|
| |