Gene YPK_2390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_2390 
SymbolfliE 
ID6087256 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp2624826 
End bp2625137 
Gene Length312 bp 
Protein Length103 aa 
Translation table11 
GC content50% 
IMG OID641597456 
Productflagellar hook-basal body protein FliE 
Protein accessionYP_001721120 
Protein GI170024615 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1677] Flagellar hook-basal body protein 
TIGRFAM ID[TIGR00205] flagellar hook-basal body complex protein FliE 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGTTC AAGGTATCGA AGGGGTTTTA CAGCAGTTAC AAGTGACCGC ATTACAGGCC 
TCGGGGTCAG CAAAAACCCT GCCCGCAGAG GCGGGCTTCG CCAGTGAACT GAAAGCGGCA
ATTGGCAAAA TCAGTGAAAA CCAACAAGTT GCCCGGACGT CGGCACAGAA TTTTGAACTG
GGTGTTCCCG GTGTTGGTTT GAATGATGTG ATGGTTAATG CGCAAAAGTC CTCGGTTTCG
TTACAGCTCG GTATTCAGGT GCGTAATAAA CTGGTTGCCG CCTACCAAGA AGTCATGAAT
ATGGGTGTGT GA
 
Protein sequence
MSVQGIEGVL QQLQVTALQA SGSAKTLPAE AGFASELKAA IGKISENQQV ARTSAQNFEL 
GVPGVGLNDV MVNAQKSSVS LQLGIQVRNK LVAAYQEVMN MGV