Gene YPK_2387 details

Gene Information

• Locus tag: YPK_2387
• ID: 6088874
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pseudotuberculosis YPIII
• Kingdom: Bacteria
• Replicon accession: NC_010465
• Strand: +
• Start bp: 2622927
• End bp: 2623538
• Gene Length: 612 bp
• Protein Length: 203 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 641597453
• Product: HhH-GPD family protein
• Protein accession: YP_001721117
• Protein GI: 170024612
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0122] 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGTTCTATA CCTACGGCGA AACAGAAATA AATCATCTGA AACGGCGGGA TAAAAAAATG 
GCCGCAGCTA TTGAGCGTTT GGGGATGTTA GAGCGCCCAT TATCGCCGGA CTTATTCGCT 
GCATTGATCA GAAATATTGT TGATCAGCAA ATTTCAGTTA AAGCGGCGCA AACCGTTAAT 
ACACGCTTAA CCCTATTATT GGGTAGCATC ACCCCCGCCA CCGTTGCCGC TGCCTCCGCC 
GAGGCGATTC AACGCTGTGG TATGACCATG AGGAAAGCGG GTTATATTAA AGGGGCGGCC 
GATGCGGCCA TTAATGGTTC GCTGGATTTA TCTGTTATTG CGCAATTGCC TGATAACGAG 
GTTATTACAC AGCTTTCACG TCTTGACGGC GTAGGGGTTT GGACAGCGGA AATGCTGTTG 
ATCTCCTCAT TGTCACGGCC AGATATTGTC AGTTGGGGAG ATTTAGCCAT CCGCCGCGGC 
ATGATGAATT TATATCGCCA TAAAACCCTG CCCCGTGAGC GTTTCGAGCG CTATCGCCGC 
CGATATACCC CATACGGAAC AACTGCCTCT CTTTATTTAT GGGCGTTGTC ACACAAAACG 
CTGGAGGATT GA 

 

Protein sequence

MFYTYGETEI NHLKRRDKKM AAAIERLGML ERPLSPDLFA ALIRNIVDQQ ISVKAAQTVN 
TRLTLLLGSI TPATVAAASA EAIQRCGMTM RKAGYIKGAA DAAINGSLDL SVIAQLPDNE 
VITQLSRLDG VGVWTAEMLL ISSLSRPDIV SWGDLAIRRG MMNLYRHKTL PRERFERYRR 
RYTPYGTTAS LYLWALSHKT LED