| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_2385 |
|---|
| Symbol | |
|---|
| ID | 6088324 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis YPIII |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010465 |
|---|
| Strand | + |
|---|
| Start bp | 2618583 |
|---|
| End bp | 2619458 |
|---|
| Gene Length | 876 bp |
|---|
| Protein Length | 291 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 641597451 |
|---|
| Product | AraC family transcriptional regulator |
|---|
| Protein accession | YP_001721115 |
|---|
| Protein GI | 170024610 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACATA AAATCAGTTT CTGTCCCGGT GTGGGTAGCG CAGCGCATAT TATTCAACAT
TCCGAGTTGC TTCTCACTTC AGTCTATATT GAGCACCCGT TGCTCATTAT GGTTAATCGT
GGGTATAAAA TTATCCGTTG GGAAAACCAG GAATGCGTTA TCCTGCCGGG CGAAATTGCA
GTTATAAATA GCGGGCAAAC TATTGATATT ATTAATGGGC TATCTAATGA TGACCTGTTC
TTCAGTCAAC AACTTCATTG TGACCCGAGT TTGATCGCGG CCTTTGCTCA TCACCCTACT
TCAGCAGATT TGGGGGTTAT TCCCGGCGTG ATGGCAATCC GTAATTTAGC ACCTGAATTC
ATTAATACGT TTGGCAATAT ATTTAACTCA ATATCAGAAA ATAGTGATAT TCCAACGGTA
ATCATCAAGC ACCGTATGCT TGAGTTATTA CTTTGGCTGG CGCAGCGTGA TGTTAAATTT
ATATTAAATG ACGGTAACGG CTTGAGTGAA AAAGTGCGCC GCTGCTTGGC CAGCGATCCA
CACAAGATAT GGTCCGCTTC TGAAGTAGCC GAACACATGA CAATGAGTGA AGTGGTATTA
CGGCGAAAGT TAGCAGCAGA AAATATACTC TTACGTGATT TAATGATCGA TGTTCGCATG
ACCAGTGCAC TTCGCCTATT ACAAGGCACG GATTGGCCGA TCTCATTGAT TGCCAATCAA
ATCGGTTATG AAAGTTCATC ACGTTTTGCC GAACGTTTTC GTAAGCGCTT TGGTTTTGCA
CCAACCGCTA TTCGCGGCCA CCATCGCTTG CAACCGGTAG AGAGTGAATC ACCGATACAC
TCAGTTAATC GTTACCTTAA GCCCTCATAT TCCTGA
|
|---|
| Protein sequence | MKHKISFCPG VGSAAHIIQH SELLLTSVYI EHPLLIMVNR GYKIIRWENQ ECVILPGEIA
VINSGQTIDI INGLSNDDLF FSQQLHCDPS LIAAFAHHPT SADLGVIPGV MAIRNLAPEF
INTFGNIFNS ISENSDIPTV IIKHRMLELL LWLAQRDVKF ILNDGNGLSE KVRRCLASDP
HKIWSASEVA EHMTMSEVVL RRKLAAENIL LRDLMIDVRM TSALRLLQGT DWPISLIANQ
IGYESSSRFA ERFRKRFGFA PTAIRGHHRL QPVESESPIH SVNRYLKPSY S
|
|---|
| |