Gene YPK_2383 details

Gene Information

• Locus tag: YPK_2383
• Symbol: fliS
• ID: 6088563
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pseudotuberculosis YPIII
• Kingdom: Bacteria
• Replicon accession: NC_010465
• Strand: +
• Start bp: 2617511
• End bp: 2617909
• Gene Length: 399 bp
• Protein Length: 132 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 641597449
• Product: flagellar protein FliS
• Protein accession: YP_001721113
• Protein GI: 170024608
• COG category: [N] Cell motility; [O] Posttranslational modification, protein turnover, chaperones; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG1516] Flagellin-specific chaperone FliS
• TIGRFAM ID: [TIGR00208] flagellar biosynthetic protein FliS

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTATAAGC GATCTGGAAG TCAGGCTTAC GCACAGGTAG GCCTGGAAAG TGGCGTAATG 
AGTGCCAGCC CACACCAATT GATCGTGATG CTGTTCGATG GGGCGCAAAG CGCCCTGATT 
CGCGCACGTA TTTTGATGAG CCAGGGTAAT ATTCCCGCTA AAGGTGCCGC AATATCCAAA 
GCAATTGATA TTATTAATAA CGGCCTGAGT GCGGGGCTTA ATTTGGAGAA AGGCGGCGAA 
ATAGCTGAAA ATTTATCAGC CTTATATGAC TATATGTCGC GGCGCTTACT GTACGCTAAT 
TTGCATAATG ACGAACAGGC AATTAATGAA GTGTCTGCCT TGCTCGAAAA TATTGCAGAT 
GCGTGGCGGC AGATCGGCCC GAATTATCAA CCCAATTAG 

 

Protein sequence

MYKRSGSQAY AQVGLESGVM SASPHQLIVM LFDGAQSALI RARILMSQGN IPAKGAAISK 
AIDIINNGLS AGLNLEKGGE IAENLSALYD YMSRRLLYAN LHNDEQAINE VSALLENIAD 
AWRQIGPNYQ PN