Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_2377 |
Symbol | |
ID | 6088951 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 2611600 |
End bp | 2612619 |
Gene Length | 1020 bp |
Protein Length | 339 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641597443 |
Product | D-cysteine desulfhydrase |
Protein accession | YP_001721107 |
Protein GI | 170024602 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2515] 1-aminocyclopropane-1-carboxylate deaminase |
TIGRFAM ID | [TIGR01275] pyridoxal phosphate-dependent enzymes, D-cysteine desulfhydrase family |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTCATC AATTCCTTGG GGGGCACGTG ACGCTTCAAC ACAAACTGAC GCAATTCCCG CGTCTCGATC TGGTCGGTAA TGCGACGCCA TTAGAAAAGC TGTCTCGTCT ATCTGATTAT CTGGGACGTG AAATTTACAT TAAACGTGAT GATGTCACGC CTGTGGCGCT TGGCGGGAAT AAACTGCGCA AGCTAGAATT CTTAGCCGCA GATGCCTTGA GACAGGGAGC CGATACGCTG GTTACGGCTG GTGCTATTCA ATCTAATCAT GTCCGCCAAA CCGCCGCCGT GGCCGCGAAA CTGGGGCTGC ATTGCGTTGC GCTGTTGGAA AACCCCATTG GTACTGAGCA GGCAAACTAT CTGACCAATG GGAACCGGCT GTTACTGGAC CTATTCAATG TTGATGTTGT GATGTGTGAG GCATTGAACG ATCCAAATCA GCAATTAGCA GAATTGGCTA CCCGCGTGGA AGCGCAGGGT TTCCGCCCAT ATGTGGTACC GATTGGCGGT TCTAATGCCT TGGGCGCGCT GGGTTATGTG CAGTGCTCAC TGGAAATTGC TGCTCAAGCC GCGGGCAATG TTGCGTTTAG TTCGGTCGTC GTGGCCTCTG GCAGTGCGGG AACACATGCA GGATTGGCGG TTGGTCTACA GCAGTTGTTA CCCGATGCGG AATTAATCGG TGTGACGGTA TCACGTAGTG CCGATGAACA GCGGCCTAAA GTGGCACAGA TTCAACAAGC GTTGGCGACA TCATTAGGGA TGACGGACCC ATTGGCAAAA ATCACCTTGT GGGATAGTTA TTTTGCCCCG CAATATGGGA TGCCAAACGA AGAGGGGATA GCGGCTATTA AGCTCTTGGC AAGACTGGAA GGAATATTGT TGGACCCTGT GTATACCGGT AAGGCGATGG CGGGCTTACT TGATGGTATT GAACAGCAAA AATTCTGCGA CAAAGGGCCA ATTTTATTTA TCCACACTGG CGGGGCACCT GCGCTGTTTG CTTATCATCC GCAGGTGTAG
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Protein sequence | MIHQFLGGHV TLQHKLTQFP RLDLVGNATP LEKLSRLSDY LGREIYIKRD DVTPVALGGN KLRKLEFLAA DALRQGADTL VTAGAIQSNH VRQTAAVAAK LGLHCVALLE NPIGTEQANY LTNGNRLLLD LFNVDVVMCE ALNDPNQQLA ELATRVEAQG FRPYVVPIGG SNALGALGYV QCSLEIAAQA AGNVAFSSVV VASGSAGTHA GLAVGLQQLL PDAELIGVTV SRSADEQRPK VAQIQQALAT SLGMTDPLAK ITLWDSYFAP QYGMPNEEGI AAIKLLARLE GILLDPVYTG KAMAGLLDGI EQQKFCDKGP ILFIHTGGAP ALFAYHPQV
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