| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_2361 |
|---|
| Symbol | |
|---|
| ID | 6088211 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis YPIII |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010465 |
|---|
| Strand | + |
|---|
| Start bp | 2594248 |
|---|
| End bp | 2595672 |
|---|
| Gene Length | 1425 bp |
|---|
| Protein Length | 474 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 641597427 |
|---|
| Product | D-alanine/D-serine/glycine permease |
|---|
| Protein accession | YP_001721091 |
|---|
| Protein GI | 170024586 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1113] Gamma-aminobutyrate permease and related permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.149802 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGAAAGA TGGTAGACCA ATCCAAAATA GTGGCAGAGC CGTTACAAGA ACCTGAAGAA
CACCTCCAAC GAAGCCTCTC CAATCGGCAT ATCCAACTCA TCGCCATTGG CGGTGCCATA
GGTACCGGGT TGTTTATGGG ATCGGGCAAA ACCATCAGCC TTGCCGGGCC GTCGATCATT
TTCGTCTATA TGATCATTGG TTTTATGTTG TTTTTCGTGA TGCGGGCAAT GGGTGAACTG
TTGCTATCGA ATCTGAACTA TAAATCATTC AGTGATTTCT CCGCTGATTT ACTTGGCCCT
TGGGCTGGTT TTTTCACCGG TTGGACTTAC TGGTTTTGTT GGGTCATCAC CGGTATTGCT
GATGTAGTGG CCATCACCGC TTATGCACAG TTCTGGTTCC CCGATTTCTC TCAATGGGTT
GCCTCGCTAT TAGTCGTTTT ACTGTTGTTG TCACTGAACT TGGCCACAGT AAAAATGTTT
GGTGAGATGG AGTTCTGGTT TGCCATGATT AAAATCGTGG CTATCGTGGC GCTAATTTTT
GCCGGCCTAA CTATGGTCTT AGTCAGCTAT CAGTCACCAT CTGGTACCAC CGCTTCATTT
ACGCATTTAT GGAGTGACGG AGGTATGTTC CCAAAAGGGA TCAGTGGATT CTTTGCTGGC
TTCCAAATTG CCGTTTTTGC CTTTGTAGGT ATTGAACTGG TTGGGACCAC AGCGGCAGAA
ACCAAAGACC CAGAGGTGGT TTTACCACGA GCCATTAACT CCATTCCGAT TCGCATAATC
ATGTTTTATG TTTTCTCATT AATTATGATT ATGTCGGTAA CGCCGTGGAG TTCAGTCGTC
GCGGATAAAA GCCCGTTTGT TGAGTTATTC GTCTTGGTCG GGCTGCCCGC AGCGGCCAGT
GTCATTAACT TTGTGGTATT AACCTCTGCG GCCTCCTCGG CCAACAGTGG CGTGTTCTCC
ACCAGCAGGA TGTTGTTCGG GCTGGCGAAA GAAGGCGATG CACCTAAGCA ATTTGGCAAG
CTATCACGCC GTTCGGTTCC TGCCACTGGC CTGACATTCT CTTGTATCTG TCTGTTAGGC
GGGGTGGTGC TGATTTATCT TATCCCGAAC GTGATGACAG TCTTTACCTT AGTTACCACT
GTTTCGGCCA TTCTGTTTAT GTTCGTCTGG ACCATCATCC TTTGCTCTTA TTTGGTGTAT
CGCAAAAGAC GCCCAGCACT GCATAAAAAA TCCATCTACA AAATGCCAGC CGGTATTTTT
ATGTCATGGG TTTGTATGGC GTTTTTCGCC TTTGTTTTGG TACTGCTGAC ATTGGAAAGT
GATACCCGTC AGGCGTTAAT TGTTACACCG CTATGGTTTG TCATTTTGAC TGCCAGCTAT
ATCTTCCTGA AAAAACGCAG AGCCCGTTTA TATAACAGTA AATAA
|
|---|
| Protein sequence | MGKMVDQSKI VAEPLQEPEE HLQRSLSNRH IQLIAIGGAI GTGLFMGSGK TISLAGPSII
FVYMIIGFML FFVMRAMGEL LLSNLNYKSF SDFSADLLGP WAGFFTGWTY WFCWVITGIA
DVVAITAYAQ FWFPDFSQWV ASLLVVLLLL SLNLATVKMF GEMEFWFAMI KIVAIVALIF
AGLTMVLVSY QSPSGTTASF THLWSDGGMF PKGISGFFAG FQIAVFAFVG IELVGTTAAE
TKDPEVVLPR AINSIPIRII MFYVFSLIMI MSVTPWSSVV ADKSPFVELF VLVGLPAAAS
VINFVVLTSA ASSANSGVFS TSRMLFGLAK EGDAPKQFGK LSRRSVPATG LTFSCICLLG
GVVLIYLIPN VMTVFTLVTT VSAILFMFVW TIILCSYLVY RKRRPALHKK SIYKMPAGIF
MSWVCMAFFA FVLVLLTLES DTRQALIVTP LWFVILTASY IFLKKRRARL YNSK
|
|---|
| |