Gene YPK_2352 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_2352 
Symbol 
ID6088591 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp2585468 
End bp2586562 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content48% 
IMG OID641597414 
Productlate control D family protein 
Protein accessionYP_001721082 
Protein GI170024577 
COG category[R] General function prediction only 
COG ID[COG3500] Phage protein D 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.065296 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAAGCA TTGATACCGG GCATAACGAA CCCGATTATT CTATTTCCGT GGATGGCATA 
GATAAAACGG GTGGCATTAA AAAGCGCCTA ATGTCATTGA CGTTAACTGA TAACCGGGGC
TTTGAAGCCG ATCAATTAGA TATTGAGTTT GATGACGCGG ACGGTAAAGT AGAGTTACCC
CGTCGTGGCG CTAAAATAGC GGTATCACTC GGCTGGAAAG GCGCAGCGCT GATCGATAAA
GGTACATTCA CCGTAGATGA AATAGAGCAT AGCGGCGCAC CGGATAAGCT GACGATTCGC
GCCCGCAGTG CGGATTTTCG TGAAACGCTT AATATTCGCC GTGATCACTC TTACCATAAG
ACCACGATTG GCGGGATAAT TAAAACCGTT GCCGAGCGAA ATAAACTCAC GCCAACATTA
AATAAAGCGA TGTCTGATTT AGCTGTTGAC CATATAGACC AAACCAACGA ATCAGACGGT
AATTTCATTA CCCGACTGGC GAAACAATAT GGCGCTATTG CCGCTGTGAA AAATGGCAAT
TTGTTATTTA TTCGTCAGGG CCAGTCGAAA ACTGCCAGCG GTAAACCGAT CCCGATGATG
ACCATTATCC GCAGCTTGGG CGACGGCCAT CAGTTTAGTA TGGCTGACCG GGGCGCTTAT
ACCGGTGTGG TAGCGAACTG GCTCAACACC CGCACCACTG AAAAACCCGT GGTTAAGGTA
AAGCGAAAAC GCAAACGTAA GGCGACCACT ACCGCCAAGC CCAAAGAGCC AGAAGAGAAA
CAGGGTGAAT ATCTGATCGG TACTGATGAG AATGTGCTGA CCTTACGCAC CACTTACGCC
AGTAAAAACA ATGCACAGCG AGCGGCTAAA TCGAATTGGG AACGGCTGCA ACGGGGCGCG
GCGAAATTCT CTATTCAGCT TGCAAAGGGG CGCGCAGATC TCTATCCAGA AGTGCCGGTT
AAAGTTACTG GATTCAAAAA ACAGATTGAT GAAGCAGATT GGACGCTGGT CACGGTGACC
CATTCCGTGA GTGACAGCGG TTTTACTACC GCGCTGGAAT TAGAAGTGAA AATAGATGAT
TTGGATATGG AATGA
 
Protein sequence
MISIDTGHNE PDYSISVDGI DKTGGIKKRL MSLTLTDNRG FEADQLDIEF DDADGKVELP 
RRGAKIAVSL GWKGAALIDK GTFTVDEIEH SGAPDKLTIR ARSADFRETL NIRRDHSYHK
TTIGGIIKTV AERNKLTPTL NKAMSDLAVD HIDQTNESDG NFITRLAKQY GAIAAVKNGN
LLFIRQGQSK TASGKPIPMM TIIRSLGDGH QFSMADRGAY TGVVANWLNT RTTEKPVVKV
KRKRKRKATT TAKPKEPEEK QGEYLIGTDE NVLTLRTTYA SKNNAQRAAK SNWERLQRGA
AKFSIQLAKG RADLYPEVPV KVTGFKKQID EADWTLVTVT HSVSDSGFTT ALELEVKIDD
LDME