Gene YPK_2342 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_2342 
Symbol 
ID6089165 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp2575925 
End bp2576278 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content52% 
IMG OID641597404 
ProductGPW/gp25 family protein 
Protein accessionYP_001721072 
Protein GI170024567 
COG category[R] General function prediction only 
COG ID[COG3628] Phage baseplate assembly protein W 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAACCT ATAAATATAG CGGCATGAAC CGTAACAGCG GCTTGCAGAT CGACGATATT 
GATCATATTC GCCAGTCAAT CAGTGACATT CTGGCCACAC CACAAGGCAC ACGGGTGATG
CGCCGCGATT ATGGCTCACT GTTATCAACC TTGATCGACC AGCCGCAAAA TCCCGCCCTA
CGTCTAAAAA TGATGGCCGC TGTTTATGGC GCTGTGATGC GTTGGGAGCC GCGCGTTACG
CTGAATGCCA TCAGTATTAC CACGCTGAGC AACGGCAAGA TGATTGTTGA TTTAACCGGT
AGCCGCACCG ACAGCGACAG CCGGTTGAGT TTGGCCGTGC CACTAGGAGG TTAA
 
Protein sequence
MTTYKYSGMN RNSGLQIDDI DHIRQSISDI LATPQGTRVM RRDYGSLLST LIDQPQNPAL 
RLKMMAAVYG AVMRWEPRVT LNAISITTLS NGKMIVDLTG SRTDSDSRLS LAVPLGG