| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_2325 |
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| Symbol | |
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| ID | 6087715 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | - |
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| Start bp | 2564513 |
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| End bp | 2565544 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641597387 |
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| Product | PBSX family phage portal protein |
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| Protein accession | YP_001721055 |
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| Protein GI | 170024550 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5518] Bacteriophage capsid portal protein |
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| TIGRFAM ID | [TIGR01540] phage portal protein, PBSX family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.916236 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCGCA AACAGCGAAA TAAACGCAAT ACTGCGGCAA TAGTAAAAAG CGCCGTACCA
CAAGCCGAGG CGTTTACTTT TGACGACCCG ATCCCAATGA TGGATCGACG CGATATTCTG
GATTATCTGG AATGCGCAGT AATGGATCGC TGGTATGAGC CGCCGGTGTC ATTCAACGGT
CTGGCTAAAT CCTTTCGTGC GGCGGTGCAT CACAGCTCGC CAATCTATAT GAAACGTAAT
GTACTGGTTA GTCTGTTTGA GCCTCACCGA TTACTCTCGA AACAGGATTT TAGCCGTTAT
GCGTTGGATT TCTTAGTGTT CGCCAATTCA TTTTTAGAAG CCCGCTATAA TCGGTTGGGG
GGATTGATGA AGCTAGTGCC TAGCCCGGCC AAATATACCC GCCGCGGCGT GGAGGCGGAC
ACCTATTGGT ATGTCTCATC CTATGCCAAC CCACACCCGT TTGAAGCCAA TAGCGTTTTT
CACCTGCTAG ACCCGGATAT TAATCAGGAG ATCTACGGCG TTCCTGAATA TCTCGCCTCG
CTAAACTCGA CCTGGCTTAA TGAAGCAGCC ACTTTGTTCC GCCGTAAATA TTATCTGAAT
GGCAGTCACG CTGGATTTAT TCTGTATATG AACGACGCCG CCCATAAACA GGAGGATATC
GACGCCTTAC GTAAGGCGCT GAAAGAATCC AAAGGGCCGG GCAATTTCCG CAATCTGTTT
ATGTATGCCC CGGCCGGTAA AAAGGACGGC ATACAGGTGA TCCCACTTGC AGAGGTTGCC
GCCAAGGATG AATTTGCCAG CATTAAGAAC GTCACCCGCG ACGACCAGCT CGCTATGCAA
CGGGTGCCAC CTCAACTGAT GGGGATTTTA CCCAATAACA CCGGCGGTTT TGGTGATGTA
GAAAAAGCCG CGCGGGTGTT TGCCATTAAC GAACTGGCCC CCTTGCAAGA ACGGCTGATG
GAAATAAATG ATTGGGTTGG GGAGGAAGTT GTCAGATTTA AGCCGTATGA ATTACTTGCC
AAACAAGAGT AA
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| Protein sequence | MSRKQRNKRN TAAIVKSAVP QAEAFTFDDP IPMMDRRDIL DYLECAVMDR WYEPPVSFNG
LAKSFRAAVH HSSPIYMKRN VLVSLFEPHR LLSKQDFSRY ALDFLVFANS FLEARYNRLG
GLMKLVPSPA KYTRRGVEAD TYWYVSSYAN PHPFEANSVF HLLDPDINQE IYGVPEYLAS
LNSTWLNEAA TLFRRKYYLN GSHAGFILYM NDAAHKQEDI DALRKALKES KGPGNFRNLF
MYAPAGKKDG IQVIPLAEVA AKDEFASIKN VTRDDQLAMQ RVPPQLMGIL PNNTGGFGDV
EKAARVFAIN ELAPLQERLM EINDWVGEEV VRFKPYELLA KQE
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