| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_2307 |
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| Symbol | |
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| ID | 6087714 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | - |
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| Start bp | 2553107 |
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| End bp | 2554114 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641597369 |
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| Product | integrase family protein |
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| Protein accession | YP_001721037 |
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| Protein GI | 170024532 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.109793 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGTTC GTAAATTAAC TACTGGCAAA TGGATTTGTG AGTGTTATCC CAATGGACGG
CGTGGTGAAC GGCTTCGTAA GCAGTTTGCT ACTAAAGGCG AGGCGCTCTC ATTTGAGCGC
CGTATGATGC AGAAAGATCA GGTTGTTGAG GTTTCTGTGA GCAATACATT GAAACTCAGC
AATTTAGTTA GTCGTTGGTA TGAAATGCAC GGGCAGACTT TAACATCAGG TAAAACCCGA
AAGGTAAAGT TAGAGGCTAT CTGCGAACGG TTGGGTGACC CACTGGTCAC TGATTTTGAC
AAGAATGCTT TTGCTGTTTA TCGGGAACAG CGGCTTAACG GCAAATGGCA AACTAAGGGC
AGGGCGGCAC CGAAACAAGC AACGGTTAAC CGTGAATATT CTTATCTTCG GGCAGTATTC
TCAGAGTTAA AACGGCTTGG GGAATGGATG GGTGATAATC CTCTGGATGG CTTACGCCAA
TTTAAAGAGG GGGATCAGGA ACTGGCATTT CTTTATCCTG AAGATATAAA ACGCCTACTG
GTAGCTTGTG ATGAGTCAGA GAATAAAGAC TTAGGTAACG TTGTTCGTAT ATGCCTGGCA
ACAGGCGCGA GGTGGAGTGA GGCGCAAGGG CTTTCTCAGT CTCAACTTAT GCCGAGCCGT
GTCACGTTTA CCCAGACTAA AAGTAAACGC AATCGTACAG TTCCCATCTC CAAGCGTTTA
TATGACCGCT TGCCTAAACG CCGCGGGTCA ATGTTCTCAT CCTGTTATGA TGCATTCAAA
CACGCATTGA AGAGATCCGC TATTGAGTTG CCTAAAGGGC AGCGCACACA CGTACTCAGG
CATACCTTTG CCAGTCACTT TATGATGGGC GGCGGAAACA TTTTAGTGCT GCAACAAATT
CTCGGCCATA GCACTATTTT AATGACGATG AGATATGCAC ATTTCGCTCC AGATCATCTG
GATGCAGCAC TAACCCTAAA CCCCTATGAC AAGCTTGAGA ATGACTAA
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| Protein sequence | MAVRKLTTGK WICECYPNGR RGERLRKQFA TKGEALSFER RMMQKDQVVE VSVSNTLKLS
NLVSRWYEMH GQTLTSGKTR KVKLEAICER LGDPLVTDFD KNAFAVYREQ RLNGKWQTKG
RAAPKQATVN REYSYLRAVF SELKRLGEWM GDNPLDGLRQ FKEGDQELAF LYPEDIKRLL
VACDESENKD LGNVVRICLA TGARWSEAQG LSQSQLMPSR VTFTQTKSKR NRTVPISKRL
YDRLPKRRGS MFSSCYDAFK HALKRSAIEL PKGQRTHVLR HTFASHFMMG GGNILVLQQI
LGHSTILMTM RYAHFAPDHL DAALTLNPYD KLEND
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